RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 STAG2Q8N3U4 1231 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 LRRC8CQ8TDW0 803 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 BICD1Q96G01 975 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 SPDYE3A6NKU9 549 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 ZNF507Q8TCN5 953 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 STMN2Q93045 179 aa5.48□□□□□ -1.53
HERC1-201ENST00000443617 TRIM49BA6NDI0 452 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 OPLAHO14841 1288 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PRDM1O75626 825 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 KRT18P05783 430 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 C10orf76Q5T2E6 689 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 TBC1D5Q92609 795 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PRMT1Q99873 361 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 CUEDC2Q9H467 287 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SH3BP1Q9Y3L3 701 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CFAP65Q6ZU64 1925 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 MBD4O95243 580 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 RFX5P48382 616 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 CTNNBL1Q8WYA6 563 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 CENPKQ9BS16 269 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 EHD2Q9NZN4 543 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PDP2Q9P2J9 529 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 IQGAP1P46940 1657 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 UBOX5O94941 541 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CMTR1Q8N1G2 835 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 ETNK1Q9HBU6 452 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 DR1Q01658 176 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PPFIBP2Q8ND30 876 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 DPH5Q9H2P9 285 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ADGRB1O14514 1584 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PRPF3O43395 683 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 KLC1Q07866 573 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SEPT7Q16181 437 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 QPCTQ16769 361 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 TMEM154Q6P9G4 183 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SEPT14Q6ZU15 432 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CNOT6LQ96LI5 555 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 SLITRK6Q9H5Y7 841 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 KDM6AO15550 1401 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 PRAMEF22A3QJZ6 481 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SH3BGRP55822 239 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 ANKRD40Q6AI12 368 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 MAIP1Q8WWC4 291 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ACSBG1Q96GR2 724 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PDS5AQ29RF7 1337 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 PAEPP09466 180 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ATP5DP30049 168 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ERVK-9P63128 1117 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SLC5A9Q2M3M2 681 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 DDX27Q96GQ7 796 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 TARBP1Q13395 1621 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 RNF17Q9BXT8 1623 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 SART1O43290 800 aaKnown RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 CALM1P0DP23 149 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CALM2P0DP24 149 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CALM3P0DP25 149 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SLC5A1P13866 664 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 IFI35P80217 286 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 SGMS1Q86VZ5 419 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 FAM228AQ86W67 206 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 FMO2Q99518 471 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 STX2P32856 288 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 UBL4BQ8N7F7 174 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 GDAP1Q8TB36 358 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 LPIN2Q92539 896 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ZSCAN10Q96SZ4 725 aaPredicted RBP5.47□□□□□ -1.53
HERC1-201ENST00000443617 MIS12Q9H081 205 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 DAAM1Q9Y4D1 1078 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ATP7BP35670 1465 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 GSTA2P09210 222 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 ZNF570Q96NI8 536 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CD163L1Q9NR16 1453 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 PPFIA2O75334 1257 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 FGGP02679 453 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 TRIM74Q86UV6 250 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 TRIM73Q86UV7 250 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CNKSR2Q8WXI2 1034 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 OSBPL7Q9BZF2 842 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CROCC2H7BZ55 1655 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CCNE1P24864 410 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 MSH2P43246 934 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 HEATR3Q7Z4Q2 680 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 NEK9Q8TD19 979 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 CALML4Q96GE6 196 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 LRRC27Q9C0I9 530 aa5.47□□□□□ -1.53
HERC1-201ENST00000443617 TULP4Q9NRJ4 1543 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 FAM205CA6NFA0 338 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 AGTP01019 485 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 KRT13P13646 458 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 TPP2P29144 1249 aaPredicted RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 PDE4DQ08499 809 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 NTRK3Q16288 839 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms