RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FAM86B1E9PN63 330 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 SORBS3O60504 671 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 FAM86B2P0C5J1 330 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
USP39-205ENST00000442708 KRT2P35908 639 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 ARHGAP1Q07960 439 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 TRIM29Q14134 588 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
USP39-205ENST00000442708 JADE2Q9NQC1 790 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 SMC3Q9UQE7 1217 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 Q9Y3F1 56 aa18.28■□□□□ 0.52
USP39-205ENST00000442708 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.28■□□□□ 0.52
USP39-205ENST00000442708 MKI67P46013 3256 aaKnown RBP18.27■□□□□ 0.52
USP39-205ENST00000442708 IGLV3-22A0A075B6J6 115 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 MEIS1O00470 390 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 FIBPO43427 364 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 ATP9AO75110 1047 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 FARP2O94887 1054 aaPredicted RBP18.27■□□□□ 0.52
USP39-205ENST00000442708 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
USP39-205ENST00000442708 ARP10275 920 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.52
USP39-205ENST00000442708 INF2Q27J81 1249 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 CEP55Q53EZ4 464 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 KRT25Q7Z3Z0 450 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 ANKLE1Q8NAG6 615 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 OR6J1Q8NGC5 347 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 PAWRQ96IZ0 340 aaKnown RBP18.27■□□□□ 0.52
USP39-205ENST00000442708 TELO2Q9Y4R8 837 aa18.27■□□□□ 0.52
USP39-205ENST00000442708 ALPK3Q96L96 1907 aa18.27■□□□□ 0.51
USP39-205ENST00000442708 DNM1LO00429 736 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
USP39-205ENST00000442708 COL6A1P12109 1028 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
USP39-205ENST00000442708 CIITAP33076 1130 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 MTMR1Q13613 665 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 KCNA10Q16322 511 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 GNPTABQ3T906 1256 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 GNASQ5JWF2 1037 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 HSCBQ8IWL3 235 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
USP39-205ENST00000442708 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 KIF28PB7ZC32 967 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 WNT7AO00755 349 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 GGPS1O95749 300 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 GH1P01241 217 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 TGFB3P10600 412 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 KCNA2P16389 499 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 CAPN2P17655 700 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
USP39-205ENST00000442708 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
USP39-205ENST00000442708 MYSM1Q5VVJ2 828 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 RNF180Q86T96 592 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 AFG1LQ8WV93 481 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 LENG9Q96B70 501 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 KCNH7Q9NS40 1196 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 PKD2L1Q9P0L9 805 aa18.25■□□□□ 0.51
USP39-205ENST00000442708 KBTBD13C9JR72 458 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 TDP2O95551 362 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 ZNF76P36508 570 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 USP11P51784 963 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 ACLYP53396 1101 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 NIPA1Q7RTP0 329 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
USP39-205ENST00000442708 EMID1Q96A84 441 aaPredicted RBP18.24■□□□□ 0.51
USP39-205ENST00000442708 FERMT2Q96AC1 680 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
USP39-205ENST00000442708 BRMS1Q9HCU9 246 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 PHF24Q9UPV7 400 aa18.24■□□□□ 0.51
USP39-205ENST00000442708 A6NJR5 290 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 ASGR1P07306 291 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
USP39-205ENST00000442708 HSDL1Q3SXM5 330 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 PRR16Q569H4 304 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 CYFIP1Q7L576 1253 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 SENP7Q9BQF6 1050 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
USP39-205ENST00000442708 C11orf49Q9H6J7 331 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 SPC25Q9HBM1 224 aa18.23■□□□□ 0.51
USP39-205ENST00000442708 AGO4Q9HCK5 861 aaKnown RBP18.23■□□□□ 0.51
USP39-205ENST00000442708 CYP3A7-CYP3A51PA0A087WV96 503 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 A0A1W2PQ45 241 aaPredicted RBP18.22■□□□□ 0.51
USP39-205ENST00000442708 A0A1W2PQY0 241 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 MMP3P08254 477 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 CYP3A7P24462 503 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 LAMC2Q13753 1193 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 NECAB2Q7Z6G3 386 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 NEK8Q86SG6 692 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 MBOAT7Q96N66 472 aa18.22■□□□□ 0.51
USP39-205ENST00000442708 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
USP39-205ENST00000442708 FOXP1Q9H334 677 aaPredicted RBP18.22■□□□□ 0.51
USP39-205ENST00000442708 KIF3AQ9Y496 699 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms