RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 CCDC178Q5BJE1 867 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 ARHGEF16Q5VV41 709 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 CCDC155Q8N6L0 562 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 IL31RAQ8NI17 732 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 PPTC7Q8NI37 304 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 MTMR8Q96EF0 704 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 UBAC1Q9BSL1 405 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 DSCC1Q9BVC3 393 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 MRPL11Q9Y3B7 192 aaKnown RBP9.72□□□□□ -0.85
TOP3B-209ENST00000442653 MRVI1Q9Y6F6 885 aa9.72□□□□□ -0.85
TOP3B-209ENST00000442653 KIF28PB7ZC32 967 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
TOP3B-209ENST00000442653 SP2Q02086 613 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 MFSD10Q14728 455 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 SEC23AQ15436 765 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 IMMTQ16891 758 aaKnown RBP9.71□□□□□ -0.86
TOP3B-209ENST00000442653 KIAA0753Q2KHM9 967 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 CNKSR3Q6P9H4 555 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 C7orf31Q8N865 590 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
TOP3B-209ENST00000442653 PDCD2LQ9BRP1 358 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 RWDD1Q9H446 243 aaPredicted RBP9.71□□□□□ -0.86
TOP3B-209ENST00000442653 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
TOP3B-209ENST00000442653 WDFY4Q6ZS81 3184 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 BAZ2BQ9UIF8 2168 aaKnown RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 GJB5O95377 273 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 MYCLP12524 364 aaPredicted RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 UBA1P22314 1058 aaKnown RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 PTK7Q13308 1070 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 AAMPQ13685 434 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 HSDL1Q3SXM5 330 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 CELF3Q5SZQ8 465 aaKnown RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 IFIT1BQ5T764 474 aaKnown RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 ZNF618Q5T7W0 954 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 CYB5R4Q7L1T6 521 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 VSIG10LQ86VR7 867 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
TOP3B-209ENST00000442653 ZBED2Q9BTP6 218 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 KATNAL1Q9BW62 490 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 KRT23Q9C075 422 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 BCAS3Q9H6U6 928 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 CNNM2Q9H8M5 875 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 SUGCTQ9HAC7 445 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 SENP2Q9HC62 589 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 MAD2L2Q9UI95 211 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 PCDHA1Q9Y5I3 950 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 MYH7BA7E2Y1 1941 aa9.7□□□□□ -0.86
TOP3B-209ENST00000442653 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 LINC01553A4QN01 128 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 HIP1O00291 1037 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 ZBTB5O15062 677 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 PPFIA4O75335 1185 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 PARNO95453 639 aaKnown RBP9.69□□□□□ -0.86
TOP3B-209ENST00000442653 GGPS1O95749 300 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 PGM5Q15124 567 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
TOP3B-209ENST00000442653 SERINC5Q86VE9 423 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 HOMER1Q86YM7 354 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 EXOC6Q8TAG9 804 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 HLA-CQ95604 372 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 RAD9AQ99638 391 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 C16orf70Q9BSU1 422 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 COG5Q9UP83 839 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 TAF6LQ9Y6J9 622 aa9.69□□□□□ -0.86
TOP3B-209ENST00000442653 CYTH3O43739 400 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 LGR5O75473 907 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 GSPT1P15170 499 aaKnown RBP9.68□□□□□ -0.86
TOP3B-209ENST00000442653 HOXC8P31273 242 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 THPOP40225 353 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 ERVK-21P61565 698 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 IKBKEQ14164 716 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 GRM4Q14833 912 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 KHSRPQ92945 711 aaKnown RBP eCLIP9.68□□□□□ -0.86
TOP3B-209ENST00000442653 PIGSQ96S52 555 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 OSBPL7Q9BZF2 842 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 EPHX3Q9H6B9 360 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 TELO2Q9Y4R8 837 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 PIEZO1Q92508 2521 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 SIP14410 1827 aa9.68□□□□□ -0.86
TOP3B-209ENST00000442653 GCOM1H8Y6P7 765 aaPredicted RBP9.67□□□□□ -0.86
TOP3B-209ENST00000442653 EFCAB14O75071 495 aa9.67□□□□□ -0.86
TOP3B-209ENST00000442653 POLR2MP0CAP2 368 aa9.67□□□□□ -0.86
TOP3B-209ENST00000442653 SMIM10L2AP0DMW4 78 aa9.67□□□□□ -0.86
TOP3B-209ENST00000442653 SMIM10L2BP0DMW5 78 aa9.67□□□□□ -0.86
TOP3B-209ENST00000442653 PDE4AP27815 886 aa9.67□□□□□ -0.86
TOP3B-209ENST00000442653 CCND2P30279 289 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms