RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 PPTC7Q8NI37 304 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 BICD2Q8TD16 824 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 GPRASP2Q96D09 838 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 PCDHA6Q9UN73 950 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 PCDHA8Q9Y5H6 950 aa14.38□□□□□ -0.11
CDCA4P3-201ENST00000442572 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 PQBP1O60828 265 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 PPFIA4O75335 1185 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 DEXIO95424 95 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 MMP3P08254 477 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 HOXD8P13378 290 aaPredicted RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 MAGEA10P43363 369 aaPredicted RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 CLK2P49760 499 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 CCT2P78371 535 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 SSRP1Q08945 709 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 FAAP100Q0VG06 881 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 CELF3Q5SZQ8 465 aaKnown RBP14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 FAM126BQ8IXS8 530 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 COPS5Q92905 334 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 C6orf50Q9HD87 102 aa14.37□□□□□ -0.11
CDCA4P3-201ENST00000442572 SEC24BO95487 1268 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 CD4P01730 458 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 MYL3P08590 195 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 SUPT20HL2P0C7V6 817 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 PTGS1P23219 599 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 UBE2SQ16763 222 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 NFRKBQ6P4R8 1299 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 PHKBQ93100 1093 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 SLC26A6Q9BXS9 759 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 TMEM39AQ9NV64 488 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 GRIN2DO15399 1336 aa14.36□□□□□ -0.11
CDCA4P3-201ENST00000442572 PFKFB2O60825 505 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 GGPS1O95749 300 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 RAG1P15918 1043 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 SREBF1P36956 1147 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 METTL7BQ6UX53 244 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 REXO1Q8N1G1 1221 aaKnown RBP14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 SPATA33Q96N06 139 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 ANO3Q9BYT9 981 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 MLXIPQ9HAP2 919 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 STK36Q9NRP7 1315 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
CDCA4P3-201ENST00000442572 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 TRIOBPQ9H2D6 2365 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 NEK4P51957 841 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 AK2P54819 239 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 SP2Q02086 613 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 SESTD1Q86VW0 696 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 JADE2Q9NQC1 790 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 RTEL1Q9NZ71 1219 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 TPCN1Q9ULQ1 816 aa14.34□□□□□ -0.11
CDCA4P3-201ENST00000442572 MYH9P35579 1960 aaKnown RBP14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 F2P00734 622 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 TIMP1P01033 207 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 CYP3A4P08684 503 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 PSMC6P62333 389 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 SCRN1Q12765 414 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 SEMA3FQ13275 785 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 MTMR1Q13613 665 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 HSDL1Q3SXM5 330 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 TDHQ8IZJ6 230 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 MXRA8Q9BRK3 442 aa14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 UPF2Q9HAU5 1272 aaKnown RBP14.33□□□□□ -0.12
CDCA4P3-201ENST00000442572 HAS3O00219 553 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 NOP56O00567 594 aaKnown RBP14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 XBP1P17861 261 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 ITGB5P18084 799 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 RBM25P49756 843 aaKnown RBP14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 STK3Q13188 491 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 CEP55Q53EZ4 464 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 MFSD5Q6N075 450 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 CRYGNQ8WXF5 182 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 WASF1Q92558 559 aa14.32□□□□□ -0.12
CDCA4P3-201ENST00000442572 BADQ92934 168 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms