RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 NR2E3Q9Y5X4 410 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 UBIAD1Q9Y5Z9 338 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 CYP3A4P08684 503 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 MCM2P49736 904 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 IRX5P78411 483 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 NEDD9Q14511 834 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 LRRC26Q2I0M4 334 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 JAKMIP3Q5VZ66 844 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 CRYGNQ8WXF5 182 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 TMEM260Q9NX78 707 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 PCDHA4Q9UN74 947 aa17.18■□□□□ 0.34
CSNK1E-210ENST00000442216 A0A0U1RQG5 324 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 UBA1P22314 1058 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 PTGS1P23219 599 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 CELF3Q5SZQ8 465 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 DHX37Q8IY37 1157 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 BLIDQ8IZY5 108 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 AIFM3Q96NN9 605 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 JADE2Q9NQC1 790 aa17.17■□□□□ 0.34
CSNK1E-210ENST00000442216 M0R2N6 131 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 GGPS1O95749 300 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ITGB5P18084 799 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 RTP1P59025 263 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ARHGAP4P98171 946 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 SP2Q02086 613 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 NIPA1Q7RTP0 329 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 PPTC7Q8NI37 304 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 PGBD1Q96JS3 809 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 TOX2Q96NM4 488 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 MXRA8Q9BRK3 442 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ALG1Q9BT22 464 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 MROH7Q68CQ1 1323 aa17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 MKI67P46013 3256 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-210ENST00000442216 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 MMP3P08254 477 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 HOXD8P13378 290 aaPredicted RBP17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 PURAQ00577 322 aaKnown RBP17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 MTMR1Q13613 665 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 NPY5RQ15761 445 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 DGKDQ16760 1214 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 CEP55Q53EZ4 464 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 CXCL17Q6UXB2 119 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 ANKRD33Q7Z3H0 272 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 AFG1LQ8WV93 481 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 MLXIPQ9HAP2 919 aa17.15■□□□□ 0.34
CSNK1E-210ENST00000442216 ARVCFO00192 962 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 MEIS1O00470 390 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 CIITAP33076 1130 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 CDK7P50613 346 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 USP11P51784 963 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 PRPF38BQ5VTL8 546 aaKnown RBP17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 SLC43A3Q8NBI5 491 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 VTI1AQ96AJ9 217 aa17.14■□□□□ 0.33
CSNK1E-210ENST00000442216 JAK2O60674 1132 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 MYL3P08590 195 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 KCNA2P16389 499 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 ZNF76P36508 570 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 ITGA7Q13683 1181 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 TRIM60Q495X7 471 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 KCNJ14Q9UNX9 436 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 ATP11BQ9Y2G3 1177 aa17.13■□□□□ 0.33
CSNK1E-210ENST00000442216 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 NFASCO94856 1347 aa17.12■□□□□ 0.33
CSNK1E-210ENST00000442216 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 IGLV3-22A0A075B6J6 115 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 DCDC2CA8MYV0 355 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 ATP9AO75110 1047 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms