RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 RCAN1P53805 252 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 HSDL1Q3SXM5 330 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 PCNX4Q63HM2 1172 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 CUL5Q93034 780 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 GUCD1Q96NT3 240 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 BCAS3Q9H6U6 928 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 PSTPIP2Q9H939 334 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 SPATA31C2B4DYI2 1134 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 F2P00734 622 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 CDC27P30260 824 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 RTN1Q16799 776 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 FBXL16Q8N461 479 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 HERVK_113Q902F9 699 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 SCLYQ96I15 445 aa21.78■■□□□ 1.08
HMGB3P22-201ENST00000442010 KLF18A0A0U1RQI7 1052 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 ZNF286BP0CG31 522 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 PSEN2P49810 448 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 GNPTABQ3T906 1256 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 ZNF697Q5TEC3 545 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 GDF6Q6KF10 455 aaPredicted RBP21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 TYW1BQ6NUM6 668 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 XRRA1Q6P2D8 792 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 JAKMIP1Q96N16 626 aaKnown RBP21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 AGXT2Q9BYV1 514 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 TTYH1Q9H313 450 aaPredicted RBP21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 RTEL1Q9NZ71 1219 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 GTF2IRD1Q9UHL9 959 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 STXBP5LQ9Y2K9 1186 aa21.77■■□□□ 1.08
HMGB3P22-201ENST00000442010 KAT6AQ92794 2004 aa21.77■■□□□ 1.07
HMGB3P22-201ENST00000442010 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 EPB41L2O43491 1005 aaKnown RBP21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 SORBS3O60504 671 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 REC8O95072 547 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 PTGISQ16647 500 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 WWC2Q6AWC2 1192 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 Q6ZUG5 572 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 C16orf70Q9BSU1 422 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 KATNAL1Q9BW62 490 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 SEMA6BQ9H3T3 888 aa21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 CXXC1Q9P0U4 656 aaPredicted RBP21.76■■□□□ 1.07
HMGB3P22-201ENST00000442010 NID2Q14112 1375 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 GOLGA8BA8MQT2 603 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 FIBPO43427 364 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 FGBP02675 491 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 MFSD10Q14728 455 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 UBE2SQ16763 222 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 HEATR3Q7Z4Q2 680 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 FAM161BQ96MY7 647 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 HDAC6Q9UBN7 1215 aa21.75■■□□□ 1.07
HMGB3P22-201ENST00000442010 TMEM265A0A087WTH1 108 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 IQCF3P0C7M6 154 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 RPS6KB1P23443 525 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 CHMP4BP1P59074 171 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 APOBRQ0VD83 1088 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 NEDD9Q14511 834 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 KIAA0753Q2KHM9 967 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 ERICH6BQ5W0A0 696 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 BLOC1S2Q6QNY1 142 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 METTL7BQ6UX53 244 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 RPUSD2Q8IZ73 545 aaKnown RBP21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 DHX38Q92620 1227 aaKnown RBP21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 SENP7Q9BQF6 1050 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 ALG1Q9BT22 464 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 MLXIPQ9HAP2 919 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 PPP4R2Q9NY27 417 aa21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 V9GY48 417 aaPredicted RBP21.74■■□□□ 1.07
HMGB3P22-201ENST00000442010 PTPRSQ13332 1948 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 PFKMP08237 780 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 RBL2Q08999 1139 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 OTOP2Q7RTS6 562 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 BRF1Q92994 677 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 PCDHA6Q9UN73 950 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 TELO2Q9Y4R8 837 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 PCDHA8Q9Y5H6 950 aa21.73■■□□□ 1.07
HMGB3P22-201ENST00000442010 GRXCR1A8MXD5 290 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 hCG_1984214I3L0E3 225 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 STXBP3O00186 592 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 ITGB5P18084 799 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 BFSP2Q13515 415 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 HIC1Q14526 733 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 PPP1R18Q6NYC8 613 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 CYFIP1Q7L576 1253 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 TEX2Q8IWB9 1127 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 ZNF713Q8N859 430 aaPredicted RBP21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 C7orf31Q8N865 590 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 GPRASP2Q96D09 838 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 GPR20Q99678 358 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 USP26Q9BXU7 913 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 PBX4Q9BYU1 374 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 RIC8AQ9NPQ8 531 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 NOD1Q9Y239 953 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 UBIAD1Q9Y5Z9 338 aa21.72■■□□□ 1.07
HMGB3P22-201ENST00000442010 SPDYE3A6NKU9 549 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms