RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ITGB5P18084 799 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 ICAM3P32942 547 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 SREBF1P36956 1147 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 SP2Q02086 613 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 KCNV1Q6PIU1 500 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 GJB4Q9NTQ9 266 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 PCDH10Q9P2E7 1040 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 KCNJ14Q9UNX9 436 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 UBIAD1Q9Y5Z9 338 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 MYH7BA7E2Y1 1941 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 A6NJR5 290 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 SPATA31C2B4DYI2 1134 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 ST18O60284 1047 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 ZEB2O60315 1214 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 MMP3P08254 477 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 NLRX1Q86UT6 975 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 DHX37Q8IY37 1157 aaKnown RBP20.61■□□□□ 0.89
CPSF4-205ENST00000440514 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 BCAS3Q9H6U6 928 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 PCDHA4Q9UN74 947 aa20.61■□□□□ 0.89
CPSF4-205ENST00000440514 H0YGN5 161 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 FOSBP53539 338 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 PSMC6P62333 389 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 ARHGAP4P98171 946 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 PURAQ00577 322 aaKnown RBP20.6■□□□□ 0.89
CPSF4-205ENST00000440514 NPY5RQ15761 445 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 CELF3Q5SZQ8 465 aaKnown RBP20.6■□□□□ 0.89
CPSF4-205ENST00000440514 EMID1Q96A84 441 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-205ENST00000440514 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 GPRASP2Q96D09 838 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-205ENST00000440514 POLR3EQ9NVU0 708 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 PKD2L1Q9P0L9 805 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 ZMYND8Q9ULU4 1186 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-205ENST00000440514 NR2E3Q9Y5X4 410 aa20.6■□□□□ 0.89
CPSF4-205ENST00000440514 ELP1O95163 1332 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 A0A0U1RQG5 324 aaPredicted RBP20.59■□□□□ 0.89
CPSF4-205ENST00000440514 TGFB3P10600 412 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 SYN1P17600 705 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 MTMR1Q13613 665 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 BRDTQ58F21 947 aaPredicted RBP20.59■□□□□ 0.89
CPSF4-205ENST00000440514 PRPF38BQ5VTL8 546 aaKnown RBP20.59■□□□□ 0.89
CPSF4-205ENST00000440514 C1orf53Q5VUE5 145 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 MYSM1Q5VVJ2 828 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 BLIDQ8IZY5 108 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 DAGLBQ8NCG7 672 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 WASF1Q92558 559 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 PHF20Q9BVI0 1012 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 JADE2Q9NQC1 790 aa20.59■□□□□ 0.89
CPSF4-205ENST00000440514 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
CPSF4-205ENST00000440514 PQBP1O60828 265 aaKnown RBP20.58■□□□□ 0.89
CPSF4-205ENST00000440514 CABYRO75952 493 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 LAMC2Q13753 1193 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 HSDL1Q3SXM5 330 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 MCTP2Q6DN12 878 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 PPTC7Q8NI37 304 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 CYP2W1Q8TAV3 490 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 PPP1R13LQ8WUF5 828 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 CRYGNQ8WXF5 182 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 SPATA33Q96N06 139 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 MXRA8Q9BRK3 442 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.89
CPSF4-205ENST00000440514 MLXIPQ9HAP2 919 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
CPSF4-205ENST00000440514 SCN10AQ9Y5Y9 1956 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 GRIN2DO15399 1336 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 ATP9AO75110 1047 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 KCNA2P16389 499 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 XBP1P17861 261 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 TLE2Q04725 743 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 CYFIP1Q7L576 1253 aa20.57■□□□□ 0.88
CPSF4-205ENST00000440514 FAM177A1Q8N128 213 aaPredicted RBP20.57■□□□□ 0.88
CPSF4-205ENST00000440514 LTBP2Q14767 1821 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 FAM86B1E9PN63 330 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 M0R2N6 131 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 FAM86B2P0C5J1 330 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 ZNF286BP0CG31 522 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 ZNF76P36508 570 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 SP4Q02446 784 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 ITGA7Q13683 1181 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 NEDD9Q14511 834 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 METTL7BQ6UX53 244 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 OXER1Q8TDS5 423 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 CDHR1Q96JP9 859 aa20.56■□□□□ 0.88
CPSF4-205ENST00000440514 PRDM5Q9NQX1 630 aaPredicted RBP20.56■□□□□ 0.88
CPSF4-205ENST00000440514 IGLV3-22A0A075B6J6 115 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 ARVCFO00192 962 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 KPNA6O60684 536 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 CYP3A4P08684 503 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 ARP10275 920 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 CHMP4BP1P59074 171 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 DGKDQ16760 1214 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 GALNT17Q6IS24 598 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 SLC43A3Q8NBI5 491 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 LLPHQ9BRT6 129 aaKnown RBP20.55■□□□□ 0.88
CPSF4-205ENST00000440514 PDLIM7Q9NR12 457 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 KCNH7Q9NS40 1196 aa20.55■□□□□ 0.88
CPSF4-205ENST00000440514 HOXD8P13378 290 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms