RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 RABGAP1Q9Y3P9 1069 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 E9PMD0 336 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 RPA1P27694 616 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 HSD17B4P51659 736 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 USP14P54578 494 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 COASYQ13057 564 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 TRIM14Q14142 442 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 CSGALNACT2Q8N6G5 542 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 MYRIPQ8NFW9 859 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SBF1O95248 1867 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SPATA31C1P0DKV0 1188 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 FDX1P10109 184 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 IDEP14735 1019 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 CYP11B2P19099 503 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SLC12A3P55017 1021 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 ANGEL2Q5VTE6 544 aaKnown RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 GPC2Q8N158 579 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 VPS16Q9H269 839 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 AS3MTQ9HBK9 375 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
SMAD3-202ENST00000439724 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
SMAD3-202ENST00000439724 PHIPQ8WWQ0 1821 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 MFAP3LO75121 409 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 TUBB4AP04350 444 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 GYPCP04921 128 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 UQCRHP07919 91 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 VCAM1P19320 739 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 LMNB1P20700 586 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 FECHP22830 423 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
SMAD3-202ENST00000439724 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-202ENST00000439724 LRRC63Q05C16 580 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 RBL2Q08999 1139 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 MTMR2Q13614 643 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 CEP55Q53EZ4 464 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 GPBP1Q86WP2 473 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
SMAD3-202ENST00000439724 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
SMAD3-202ENST00000439724 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
SMAD3-202ENST00000439724 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 PSMD10O75832 226 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 TPM1P09493 284 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 CEP135Q66GS9 1140 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
SMAD3-202ENST00000439724 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 TUFT1Q9NNX1 390 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms