RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 PRDX5P30044 214 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 RPS6KA1Q15418 735 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 SFMBT2Q5VUG0 894 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 STK38LQ9Y2H1 464 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 KRIT1O00522 736 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 DONSONQ9NYP3 566 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 BCS1LQ9Y276 419 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 MYMKA6NI61 221 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 FSBPO95073 299 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 IL2RBP14784 551 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 KBTBD4Q9NVX7 518 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 ABCB4P21439 1286 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 CALML3P27482 149 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 SPAG5Q96R06 1193 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 LBHD1Q9BQE6 289 aaPredicted RBP13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
SLC38A1-202ENST00000439706 MYO5AQ9Y4I1 1855 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 MROH5Q6ZUA9 1318 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 TTI1O43156 1089 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 SART1O43290 800 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 CALM1P0DP23 149 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 CALM2P0DP24 149 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 CALM3P0DP25 149 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 FGFR2P21802 821 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 KIF5BP33176 963 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 DAAM2Q86T65 1068 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 HVCN1Q96D96 273 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 TNNC1P63316 161 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 LRRC14Q15048 493 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 ELAC2Q9BQ52 826 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-202ENST00000439706 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 SCTRP47872 440 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 SMTNP53814 917 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 OTUD6AQ7L8S5 288 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 CCDC25Q86WR0 208 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TBCKQ8TEA7 893 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 CAVIN3Q969G5 261 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 RGPD5Q99666 1765 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 C4AP0C0L4 1744 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TLR2O60603 784 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 OR52Z1P0C646 297 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 ZNF211Q13398 564 aaPredicted RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 CCDC84Q86UT8 332 aaPredicted RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 KIF2BQ8N4N8 673 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 SIK3Q9Y2K2 1263 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TRHP20396 242 aaPredicted RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 FAM228AQ86W67 206 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 ERGIC2Q96RQ1 377 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 FGFBP2Q9BYJ0 223 aa13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 TAF1DQ9H5J8 278 aaPredicted RBP13.62□□□□□ -0.23
SLC38A1-202ENST00000439706 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 TNNI2P48788 182 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 SNX29Q8TEQ0 813 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 FOXO6A8MYZ6 492 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 HMGB1P1B2RPK0 211 aaPredicted RBP13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 CYTH3O43739 400 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 AMPD3Q01432 767 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 KCNB1Q14721 858 aa13.61□□□□□ -0.23
SLC38A1-202ENST00000439706 UAP1Q16222 522 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms