RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 MRPS9P82933 396 aaKnown RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 ARHGAP1Q07960 439 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 AP3B2Q13367 1082 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 TOB2Q14106 344 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 MYSM1Q5VVJ2 828 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 SH3RF1Q7Z6J0 888 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 TMEM199Q8N511 208 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 BICD2Q8TD16 824 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 GPRASP2Q96D09 838 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 ZFP91Q96JP5 570 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-216ENST00000439475 SENP7Q9BQF6 1050 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 SLC26A6Q9BXS9 759 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 NID2Q14112 1375 aa11.99□□□□□ -0.49
MCF2L-216ENST00000439475 ESYT2A0FGR8 921 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 CDKL5O76039 1030 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 RGS20O76081 388 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 CD4P01730 458 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 ZNF76P36508 570 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 UBE2SQ16763 222 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 NBPF20Q3BBV1 942 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 SPATA33Q96N06 139 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-216ENST00000439475 SLKQ9H2G2 1235 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-216ENST00000439475 TBX21Q9UL17 535 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 NOD1Q9Y239 953 aa11.98□□□□□ -0.49
MCF2L-216ENST00000439475 GRIN2DO15399 1336 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
MCF2L-216ENST00000439475 FPGSQ05932 587 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.498e-8■■□□□ 14.2
MCF2L-216ENST00000439475 NTRK3Q16288 839 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 MFSD5Q6N075 450 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 PHKBQ93100 1093 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
MCF2L-216ENST00000439475 TNRC18O15417 2968 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-216ENST00000439475 B4GALT4O60513 344 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 DEXIO95424 95 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 XBP1P17861 261 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 PSEN2P49810 448 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 FXR1P51114 621 aaKnown RBP eCLIP11.96□□□□□ -0.49
MCF2L-216ENST00000439475 NLRP5P59047 1200 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 STK3Q13188 491 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 MTMR1Q13613 665 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 HSDL1Q3SXM5 330 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 CYFIP1Q7L576 1253 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
MCF2L-216ENST00000439475 C7orf31Q8N865 590 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 RETREG2Q8NC44 543 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 ANO3Q9BYT9 981 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 HIPK3Q9H422 1215 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.49
MCF2L-216ENST00000439475 SH3GLB2Q9NR46 395 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
MCF2L-216ENST00000439475 SORBS3O60504 671 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
MCF2L-216ENST00000439475 NEK4P51957 841 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 SP2Q02086 613 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 BFSP2Q13515 415 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 MFSD10Q14728 455 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 PKN1Q16512 942 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-216ENST00000439475 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
MCF2L-216ENST00000439475 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 SEPT1Q8WYJ6 367 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
MCF2L-216ENST00000439475 TRPV6Q9H1D0 765 aa11.95□□□□□ -0.5
MCF2L-216ENST00000439475 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-216ENST00000439475 SCN10AQ9Y5Y9 1956 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 H3BRB1 525 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 F2P00734 622 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-216ENST00000439475 ITGB5P18084 799 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 ITGB8P26012 769 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 SREBF1P36956 1147 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 AK2P54819 239 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 SHHQ15465 462 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 PTGISQ16647 500 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 KIAA0753Q2KHM9 967 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 CEP55Q53EZ4 464 aa11.94□□□□□ -0.5
MCF2L-216ENST00000439475 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms