RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
APP-208ENST00000439274 EP400Q96L91 3159 aa17.03■□□□□ 0.32
APP-208ENST00000439274 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
APP-208ENST00000439274 RGL2O15211 777 aa17.03■□□□□ 0.32
APP-208ENST00000439274 UFL1O94874 794 aa17.03■□□□□ 0.32
APP-208ENST00000439274 RC3H1Q5TC82 1133 aaKnown RBP17.03■□□□□ 0.32
APP-208ENST00000439274 CCDC70Q6NSX1 233 aa17.03■□□□□ 0.32
APP-208ENST00000439274 IQCDQ96DY2 449 aa17.03■□□□□ 0.32
APP-208ENST00000439274 MS4A14Q96JA4 679 aa17.03■□□□□ 0.32
APP-208ENST00000439274 ALS2CR12Q96Q35 445 aa17.03■□□□□ 0.32
APP-208ENST00000439274 TSPYL1Q9H0U9 437 aa17.03■□□□□ 0.32
APP-208ENST00000439274 HYOU1Q9Y4L1 999 aa17.03■□□□□ 0.32
APP-208ENST00000439274 VGLL3A8MV65 326 aa17.02■□□□□ 0.32
APP-208ENST00000439274 DNA2P51530 1060 aa17.02■□□□□ 0.32
APP-208ENST00000439274 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
APP-208ENST00000439274 ASTE1Q2TB18 679 aaPredicted RBP17.02■□□□□ 0.32
APP-208ENST00000439274 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
APP-208ENST00000439274 CCDC181Q5TID7 509 aa17.02■□□□□ 0.32
APP-208ENST00000439274 KRT79Q5XKE5 535 aa17.02■□□□□ 0.32
APP-208ENST00000439274 HGSNATQ68CP4 663 aa17.02■□□□□ 0.32
APP-208ENST00000439274 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.31
APP-208ENST00000439274 EHHADHQ08426 723 aa17.02■□□□□ 0.31
APP-208ENST00000439274 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.31
APP-208ENST00000439274 ZNF572Q7Z3I7 529 aaPredicted RBP17.02■□□□□ 0.31
APP-208ENST00000439274 TLR10Q9BXR5 811 aa17.02■□□□□ 0.31
APP-208ENST00000439274 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
APP-208ENST00000439274 SSBP05455 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
APP-208ENST00000439274 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
APP-208ENST00000439274 PICALMQ13492 652 aa17.01■□□□□ 0.31
APP-208ENST00000439274 TMEM119Q4V9L6 283 aa17.01■□□□□ 0.31
APP-208ENST00000439274 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
APP-208ENST00000439274 RBM12Q9NTZ6 932 aaKnown RBP17.01■□□□□ 0.31
APP-208ENST00000439274 GOLGA6CA6NDK9 693 aa17.01■□□□□ 0.31
APP-208ENST00000439274 GOLGA6DP0CG33 693 aa17.01■□□□□ 0.31
APP-208ENST00000439274 PRLRP16471 622 aa17.01■□□□□ 0.31
APP-208ENST00000439274 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
APP-208ENST00000439274 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
APP-208ENST00000439274 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
APP-208ENST00000439274 COASYQ13057 564 aa17.01■□□□□ 0.31
APP-208ENST00000439274 KLHDC7AQ5VTJ3 777 aa17.01■□□□□ 0.31
APP-208ENST00000439274 TSEN2Q8NCE0 465 aaKnown RBP17.01■□□□□ 0.31
APP-208ENST00000439274 TSG101Q99816 390 aa17.01■□□□□ 0.31
APP-208ENST00000439274 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
APP-208ENST00000439274 GOLGA6AQ9NYA3 693 aa17.01■□□□□ 0.31
APP-208ENST00000439274 TRAF5O00463 557 aa17■□□□□ 0.31
APP-208ENST00000439274 TLR2O60603 784 aa17■□□□□ 0.31
APP-208ENST00000439274 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
APP-208ENST00000439274 AKR1B1P15121 316 aa17■□□□□ 0.31
APP-208ENST00000439274 SLC20A2Q08357 652 aa17■□□□□ 0.31
APP-208ENST00000439274 NELFCDQ8IXH7 590 aa17■□□□□ 0.31
APP-208ENST00000439274 MYOCDQ8IZQ8 938 aa17■□□□□ 0.31
APP-208ENST00000439274 FAM76AQ8TAV0 307 aa17■□□□□ 0.31
APP-208ENST00000439274 HAS1Q92839 578 aa17■□□□□ 0.31
APP-208ENST00000439274 DNAJC19Q96DA6 116 aa17■□□□□ 0.31
APP-208ENST00000439274 EHD4Q9H223 541 aa17■□□□□ 0.31
APP-208ENST00000439274 MTMR4Q9NYA4 1195 aa17■□□□□ 0.31
APP-208ENST00000439274 ABCB11O95342 1321 aa17■□□□□ 0.31
APP-208ENST00000439274 PJA2O43164 708 aa17■□□□□ 0.31
APP-208ENST00000439274 NOL4O94818 638 aa17■□□□□ 0.31
APP-208ENST00000439274 PDIA5Q14554 519 aa17■□□□□ 0.31
APP-208ENST00000439274 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
APP-208ENST00000439274 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
APP-208ENST00000439274 CNBD1Q8NA66 436 aa17■□□□□ 0.31
APP-208ENST00000439274 RAB34Q9BZG1 259 aa17■□□□□ 0.31
APP-208ENST00000439274 RABEP2Q9H5N1 569 aa17■□□□□ 0.31
APP-208ENST00000439274 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
APP-208ENST00000439274 NOVP48745 357 aa16.99■□□□□ 0.31
APP-208ENST00000439274 ARID5AQ03989 594 aa16.99■□□□□ 0.31
APP-208ENST00000439274 ITIH3Q06033 890 aa16.99■□□□□ 0.31
APP-208ENST00000439274 ENOX2Q16206 610 aaKnown RBP16.99■□□□□ 0.31
APP-208ENST00000439274 ZCWPW2Q504Y3 356 aa16.99■□□□□ 0.31
APP-208ENST00000439274 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
APP-208ENST00000439274 NOX5Q96PH1 765 aa16.99■□□□□ 0.31
APP-208ENST00000439274 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
APP-208ENST00000439274 STIM2Q9P246 746 aa16.99■□□□□ 0.31
APP-208ENST00000439274 DDX25Q9UHL0 483 aaKnown RBP16.99■□□□□ 0.31
APP-208ENST00000439274 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
APP-208ENST00000439274 PPFIA4O75335 1185 aa16.99■□□□□ 0.31
APP-208ENST00000439274 RFC4P35249 363 aa16.99■□□□□ 0.31
APP-208ENST00000439274 SLC16A2P36021 539 aa16.99■□□□□ 0.31
APP-208ENST00000439274 POLR2FP61218 127 aaKnown RBP16.99■□□□□ 0.31
APP-208ENST00000439274 JMJD4Q9H9V9 463 aa16.99■□□□□ 0.31
APP-208ENST00000439274 PANK4Q9NVE7 773 aa16.99■□□□□ 0.31
APP-208ENST00000439274 E9PMD0 336 aa16.98■□□□□ 0.31
APP-208ENST00000439274 PAFAH1B1P43034 410 aa16.98■□□□□ 0.31
APP-208ENST00000439274 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
APP-208ENST00000439274 C8orf74Q6P047 294 aa16.98■□□□□ 0.31
APP-208ENST00000439274 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
APP-208ENST00000439274 RIC8AQ9NPQ8 531 aa16.98■□□□□ 0.31
APP-208ENST00000439274 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
APP-208ENST00000439274 ZSCAN5CA6NGD5 496 aaPredicted RBP16.98■□□□□ 0.31
APP-208ENST00000439274 MARCH6O60337 910 aa16.98■□□□□ 0.31
APP-208ENST00000439274 FTCDO95954 541 aa16.98■□□□□ 0.31
APP-208ENST00000439274 FKBP3Q00688 224 aaKnown RBP16.98■□□□□ 0.31
APP-208ENST00000439274 FAM26FQ5R3K3 315 aa16.98■□□□□ 0.31
APP-208ENST00000439274 TTC19Q6DKK2 380 aaPredicted RBP16.98■□□□□ 0.31
APP-208ENST00000439274 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
APP-208ENST00000439274 PACSIN2Q9UNF0 486 aaPredicted RBP16.98■□□□□ 0.31
APP-208ENST00000439274 SSU72P8A0A1W2PR75 194 aa16.97■□□□□ 0.31
APP-208ENST00000439274 ESYT3A0FGR9 886 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms