RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 IWS1Q96ST2 819 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 PRDM6Q9NQX0 595 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 COL20A1Q9P218 1284 aa10.67□□□□□ -0.7
AC011228.1-201ENST00000439027 BDP1A6H8Y1 2624 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 PFKMP08237 780 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 MYCLP12524 364 aaPredicted RBP10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 CASTP20810 708 aaKnown RBP10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 RFC2P35250 354 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 BFSP2Q13515 415 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 ADGRE1Q14246 886 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 PTGISQ16647 500 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 CCDC62Q6P9F0 684 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 MICALL1Q8N3F8 863 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 STAG2Q8N3U4 1231 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 AMNQ9BXJ7 453 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 MAF1Q9H063 256 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 PCDHA11Q9Y5I1 949 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 RBM8AQ9Y5S9 174 aaKnown RBP10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 BAZ2BQ9UIF8 2168 aaKnown RBP10.66□□□□□ -0.7
AC011228.1-201ENST00000439027 CDH23Q9H251 3354 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 SCN10AQ9Y5Y9 1956 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 EPB41L2O43491 1005 aaKnown RBP10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 SORBS3O60504 671 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 NR3C2P08235 984 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 MMP3P08254 477 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 FOXK1P85037 733 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 ARHGAP1Q07960 439 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 CYB5R4Q7L1T6 521 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 HOMER1Q86YM7 354 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 CCDC155Q8N6L0 562 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 VWCEQ96DN2 955 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 PXMP2Q9NR77 195 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 MRVI1Q9Y6F6 885 aa10.65□□□□□ -0.7
AC011228.1-201ENST00000439027 CHD7Q9P2D1 2997 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 PRRC2BQ5JSZ5 2229 aaKnown RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 ERICH2A1L162 156 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 HOXA13P31271 388 aaPredicted RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 HSPA4P34932 840 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 RBM25P49756 843 aaKnown RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 PSEN2P49810 448 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 SEC23AQ15436 765 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 DGKDQ16760 1214 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 RALYLQ86SE5 291 aaKnown RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 DHX37Q8IY37 1157 aaKnown RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 C7orf31Q8N865 590 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 KAT2BQ92831 832 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 CERS4Q9HA82 394 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 MAD2L2Q9UI95 211 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 DDX41Q9UJV9 622 aaKnown RBP10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 MYH6P13533 1939 aa10.64□□□□□ -0.71
AC011228.1-201ENST00000439027 VCANP13611 3396 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 TRIP12Q14669 1992 aaPredicted RBP10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 TET1Q8NFU7 2136 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 KIF28PB7ZC32 967 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 SLC27A2O14975 620 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 ZBTB5O15062 677 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 PPP1R11O60927 126 aaPredicted RBP10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 CA3P07451 260 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 ZNF286BP0CG31 522 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 KCNJ6P48051 423 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 HSD17B4P51659 736 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 TRAF1Q13077 416 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 GRM4Q14833 912 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 NECTIN1Q15223 517 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 CREB3L3Q68CJ9 461 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 IL27Q8NEV9 243 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 PIBF1Q8WXW3 757 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 PIGSQ96S52 555 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 HDAC6Q9UBN7 1215 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 RBM19Q9Y4C8 960 aaKnown RBP10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
AC011228.1-201ENST00000439027 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
AC011228.1-201ENST00000439027 RFXAPO00287 272 aa10.62□□□□□ -0.71
AC011228.1-201ENST00000439027 OPLAHO14841 1288 aa10.62□□□□□ -0.71
AC011228.1-201ENST00000439027 CYP21A2P08686 494 aa10.62□□□□□ -0.71
AC011228.1-201ENST00000439027 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms