RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MYSM1Q5VVJ2 828 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 NFRKBQ6P4R8 1299 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 RNF26Q9BY78 433 aaPredicted RBP28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 ALDH8A1Q9H2A2 487 aaPredicted RBP28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 RTEL1Q9NZ71 1219 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 PCDHA6Q9UN73 950 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 PCDHA8Q9Y5H6 950 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 SMCO2A6NFE2 343 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 IFNAR1P17181 557 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 CCT2P78371 535 aaKnown RBP28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 NEDD9Q14511 834 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 CDHR1Q96JP9 859 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 SPATA33Q96N06 139 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 MLXIPQ9HAP2 919 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 SCN10AQ9Y5Y9 1956 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 LAMA3Q16787 3333 aa28.35■■■□□ 2.13
RAPGEF1-206ENST00000438647 SPATA31C2B4DYI2 1134 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 SUPT20HL2P0C7V6 817 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 ITGB8P26012 769 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 PTPN11Q06124 597 aaPredicted RBP28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 NTRK3Q16288 839 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 NBPF20Q3BBV1 942 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 PHKBQ93100 1093 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 KATNAL1Q9BW62 490 aa28.34■■■□□ 2.13
RAPGEF1-206ENST00000438647 B4GALT4O60513 344 aa28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 SP2Q02086 613 aa28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 AP3B2Q13367 1082 aa28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 FAM47CQ5HY64 1035 aa28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 CPLX2Q6PUV4 134 aaKnown RBP28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 GPRASP2Q96D09 838 aa28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 NCOA5Q9HCD5 579 aaKnown RBP28.33■■■□□ 2.13
RAPGEF1-206ENST00000438647 ESYT2A0FGR8 921 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 CPLX1O14810 134 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 PPFIA4O75335 1185 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 FPGSQ05932 587 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 LRIT3Q3SXY7 679 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 MFSD5Q6N075 450 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 TRIM22Q8IYM9 498 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 SENP7Q9BQF6 1050 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 SLC26A6Q9BXS9 759 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 TRPV6Q9H1D0 765 aa28.32■■■□□ 2.12
RAPGEF1-206ENST00000438647 HOXD8P13378 290 aaPredicted RBP28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 ANKRD1Q15327 319 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 HSDL1Q3SXM5 330 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 METTL7BQ6UX53 244 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 GIMAP8Q8ND71 665 aaPredicted RBP28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 IL17RAQ96F46 866 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 HIPK3Q9H422 1215 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 C6orf50Q9HD87 102 aa28.31■■■□□ 2.12
RAPGEF1-206ENST00000438647 NOP56O00567 594 aaKnown RBP28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 GNA11P29992 359 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 SEMA3FQ13275 785 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 PKN1Q16512 942 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 MCTP2Q6DN12 878 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 TMEM199Q8N511 208 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 CCDC148Q8NFR7 591 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 ANO3Q9BYT9 981 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 PPP1R12CQ9BZL4 782 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 ZMYND12Q9H0C1 365 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 MYH7BA7E2Y1 1941 aa28.3■■■□□ 2.12
RAPGEF1-206ENST00000438647 MAFGO15525 162 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 SORBS3O60504 671 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 F2P00734 622 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 CHMP4BP1P59074 171 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 KAT2BQ92831 832 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 TRMT13Q9NUP7 481 aaKnown RBP28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 UBIAD1Q9Y5Z9 338 aa28.29■■■□□ 2.12
RAPGEF1-206ENST00000438647 CLK2P49760 499 aaKnown RBP28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 SSRP1Q08945 709 aaKnown RBP28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 STK3Q13188 491 aa28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 PPIGQ13427 754 aaKnown RBP eCLIP28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 MTMR1Q13613 665 aa28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 CYFIP1Q7L576 1253 aa28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 SESTD1Q86VW0 696 aa28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 BICD2Q8TD16 824 aa28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 LARP6Q9BRS8 491 aaKnown RBP28.28■■■□□ 2.12
RAPGEF1-206ENST00000438647 SLC34A2O95436 690 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 ZNF286BP0CG31 522 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 ITGB5P18084 799 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 PSEN2P49810 448 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 NOC4LQ9BVI4 516 aaKnown RBP28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 JADE2Q9NQC1 790 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 NOD1Q9Y239 953 aa28.27■■■□□ 2.12
RAPGEF1-206ENST00000438647 CDKL5O76039 1030 aa28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 SREBF1P36956 1147 aa28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 MFSD10Q14728 455 aa28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 REXO1Q8N1G1 1221 aaKnown RBP28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 C7orf31Q8N865 590 aa28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 SLKQ9H2G2 1235 aaPredicted RBP28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 SH3GLB2Q9NR46 395 aa28.26■■■□□ 2.11
RAPGEF1-206ENST00000438647 PPFIA3O75145 1194 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 DEXIO95424 95 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 SEC24BO95487 1268 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 CYP2C18P33260 490 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 SHHQ15465 462 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 KIAA0753Q2KHM9 967 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 PGBD1Q96JS3 809 aa28.25■■■□□ 2.11
RAPGEF1-206ENST00000438647 HAS3O00219 553 aa28.24■■■□□ 2.11
RAPGEF1-206ENST00000438647 CEP55Q53EZ4 464 aa28.24■■■□□ 2.11
RAPGEF1-206ENST00000438647 JAKMIP3Q5VZ66 844 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms