RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.86■□□□□ 0.93
HDAC6-208ENST00000438518 KCNH7Q9NS40 1196 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 CFAP45Q9UL16 551 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-208ENST00000438518 MSCO60682 206 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 INHAP05111 366 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 PRKAR2AP13861 404 aaKnown RBP20.85■□□□□ 0.93
HDAC6-208ENST00000438518 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-208ENST00000438518 NEDD9Q14511 834 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 SEPT14Q6ZU15 432 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 EEPD1Q7L9B9 569 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 SLFN12Q8IYM2 578 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 WDR11Q9BZH6 1224 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 FAM184BQ9ULE4 1060 aa20.85■□□□□ 0.93
HDAC6-208ENST00000438518 SEPT4O43236 478 aa20.84■□□□□ 0.93
HDAC6-208ENST00000438518 BAG4O95429 457 aaKnown RBP20.84■□□□□ 0.93
HDAC6-208ENST00000438518 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
HDAC6-208ENST00000438518 KCNMB3Q9NPA1 279 aa20.84■□□□□ 0.93
HDAC6-208ENST00000438518 TBC1D22BQ9NU19 505 aa20.84■□□□□ 0.93
HDAC6-208ENST00000438518 Q9Y3F1 56 aa20.84■□□□□ 0.93
HDAC6-208ENST00000438518 NFASCO94856 1347 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 IPO5O00410 1097 aaKnown RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 TXNP10599 105 aaKnown RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 MCM7P33993 719 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 PRPHP41219 470 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 FOXD4L5Q5VV16 416 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 CCDC62Q6P9F0 684 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 CYP2W1Q8TAV3 490 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 ETNPPLQ8TBG4 499 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 FOXD4L4Q8WXT5 416 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 RIT2Q99578 217 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 ZNF577Q9BSK1 485 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 AGO4Q9HCK5 861 aaKnown RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 HMX1Q9NP08 348 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 PCDHB6Q9Y5E3 794 aa20.83■□□□□ 0.93
HDAC6-208ENST00000438518 DDX49Q9Y6V7 483 aaKnown RBP20.83■□□□□ 0.93
HDAC6-208ENST00000438518 SLC37A4O43826 429 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 KRT85P78386 507 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 TNFAIP2Q03169 654 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 ZNF174Q15697 407 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 CALCRLQ16602 461 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 ANO1Q5XXA6 986 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 POTEDQ86YR6 584 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 ARMC5Q96C12 935 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 SDF4Q9BRK5 362 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 TCEAL9Q9UHQ7 104 aa20.82■□□□□ 0.92
HDAC6-208ENST00000438518 WNT7AO00755 349 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 MSH4O15457 936 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 MARCH6O60337 910 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 YEATS4O95619 227 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 OR52Z1P0C646 297 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 ARP10275 920 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 KCNA2P16389 499 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 ADCYAP1R1P41586 468 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 NASPP49321 788 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 ATP2C1P98194 919 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 SEMA3FQ13275 785 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 ARL6IP4Q66PJ3 421 aaKnown RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 FAM173BQ6P4H8 233 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 SLC5A5Q92911 643 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 EMID1Q96A84 441 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 ZFP91Q96JP5 570 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-208ENST00000438518 MTMR9Q96QG7 549 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 FRMPD3Q5JV73 1810 aa20.81■□□□□ 0.92
HDAC6-208ENST00000438518 DUSP11O75319 330 aaKnown RBP20.8■□□□□ 0.92
HDAC6-208ENST00000438518 GH1P01241 217 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 CAPN2P17655 700 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 UBA1P22314 1058 aaKnown RBP20.8■□□□□ 0.92
HDAC6-208ENST00000438518 TRIM32Q13049 653 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 PTGDRQ13258 359 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 NBR1Q14596 966 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 PRAMEF19Q5SWL8 479 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 METTL7BQ6UX53 244 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 TRPV1Q8NER1 839 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 SH3TC2Q8TF17 1288 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 USP28Q96RU2 1077 aa20.8■□□□□ 0.92
HDAC6-208ENST00000438518 ARIH2O95376 493 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 RARBP10826 455 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 CNGA1P29973 690 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 KRT76Q01546 638 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 LAMC2Q13753 1193 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 LRCH2Q5VUJ6 765 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 TEKT3Q9BXF9 490 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 RAB34Q9BZG1 259 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 SCAND2PQ9GZW5 306 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-208ENST00000438518 DDX20Q9UHI6 824 aaKnown RBP20.79■□□□□ 0.92
HDAC6-208ENST00000438518 GNEQ9Y223 722 aaKnown RBP20.79■□□□□ 0.92
HDAC6-208ENST00000438518 HTTP42858 3142 aa20.79■□□□□ 0.92
HDAC6-208ENST00000438518 GAS7O60861 476 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 PPP6R2O75170 966 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 PSMD10O75832 226 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 SMPD1P17405 629 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 DNM1Q05193 864 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms