RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 MMP3P08254 477 aa13.51□□□□□ -0.25
RTN4-211ENST00000438462 IL15P40933 162 aaPredicted RBP13.51□□□□□ -0.25
RTN4-211ENST00000438462 DUSP6Q16828 381 aa13.51□□□□□ -0.25
RTN4-211ENST00000438462 ZCCHC14Q8WYQ9 949 aaKnown RBP13.51□□□□□ -0.25
RTN4-211ENST00000438462 DLGAP2Q9P1A6 1054 aa13.51□□□□□ -0.25
RTN4-211ENST00000438462 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
RTN4-211ENST00000438462 CACNA1IQ9P0X4 2223 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 KRBA1A5PL33 1030 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 PTK7Q13308 1070 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
RTN4-211ENST00000438462 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
RTN4-211ENST00000438462 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 SEPT8Q92599 483 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
RTN4-211ENST00000438462 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
RTN4-211ENST00000438462 TBC1D17Q9HA65 648 aa13.5□□□□□ -0.25
RTN4-211ENST00000438462 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
RTN4-211ENST00000438462 IGSF10Q6WRI0 2623 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 DENND4AQ7Z401 1863 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 A6NJR5 290 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 APAF1O14727 1248 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 GDF9O60383 454 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
RTN4-211ENST00000438462 KCNC3Q14003 757 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 LLGL2Q6P1M3 1020 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 NECTIN4Q96NY8 510 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 ACAD9Q9H845 621 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 PCDHGA2Q9Y5H1 932 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 DMXL2Q8TDJ6 3036 aa13.49□□□□□ -0.25
RTN4-211ENST00000438462 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
RTN4-211ENST00000438462 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
RTN4-211ENST00000438462 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 ZBED4O75132 1171 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 AKR1B1P15121 316 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 TDGQ13569 410 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 ZNF528Q3MIS6 628 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
RTN4-211ENST00000438462 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
RTN4-211ENST00000438462 MYH7BA7E2Y1 1941 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
RTN4-211ENST00000438462 CFHP08603 1231 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
RTN4-211ENST00000438462 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 COPS5Q92905 334 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
RTN4-211ENST00000438462 ADAM33Q9BZ11 813 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 OSBPL7Q9BZF2 842 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
RTN4-211ENST00000438462 TENM4Q6N022 2769 aa13.47□□□□□ -0.25
RTN4-211ENST00000438462 NARSO43776 548 aaKnown RBP13.46□□□□□ -0.25
RTN4-211ENST00000438462 GLULP15104 373 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 HOXB8P17481 243 aaPredicted RBP13.46□□□□□ -0.25
RTN4-211ENST00000438462 THPOP40225 353 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 PPP2R5BQ15173 497 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 CES5AQ6NT32 575 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
RTN4-211ENST00000438462 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
RTN4-211ENST00000438462 SLC38A10Q9HBR0 1119 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 MIA3Q5JRA6 1907 aa13.46□□□□□ -0.25
RTN4-211ENST00000438462 IL16Q14005 1332 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 WEE2P0C1S8 567 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 SPINK2P20155 84 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 CCDC6Q16204 474 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 C7orf31Q8N865 590 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 ZBTB44Q8NCP5 570 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 MORC4Q8TE76 937 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 KAT2BQ92831 832 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 GATA6Q92908 595 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
RTN4-211ENST00000438462 SNRKQ9NRH2 765 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 RNF146Q9NTX7 359 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 LAMA5O15230 3695 aa13.45□□□□□ -0.26
RTN4-211ENST00000438462 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
RTN4-211ENST00000438462 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 LILRB5O75023 590 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 PPFIA3O75145 1194 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 VAMP4O75379 141 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 CYP7A1P22680 504 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 OAZ1P54368 228 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 LPAL2Q16609 132 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
RTN4-211ENST00000438462 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 CYP26B1Q9NR63 512 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 SEMA4GQ9NTN9 838 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms