RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 HOXA13P31271 388 aaPredicted RBP13.06□□□□□ -0.32
SNHG3-202ENST00000437681 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
SNHG3-202ENST00000437681 RNF180Q86T96 592 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 LAD1O00515 517 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 GJB2P29033 226 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 RIT2Q99578 217 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
SNHG3-202ENST00000437681 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
SNHG3-202ENST00000437681 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 ADAMTS4O75173 837 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 BMP15O95972 392 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 CCND3P30281 292 aaPredicted RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 UBE2SQ16763 222 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 A6NJR5 290 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 CCSAPQ6IQ19 270 aaPredicted RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 KCTD17Q8N5Z5 321 aa13.05□□□□□ -0.32
SNHG3-202ENST00000437681 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
SNHG3-202ENST00000437681 ELP1O95163 1332 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 METTL7BQ6UX53 244 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
SNHG3-202ENST00000437681 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
SNHG3-202ENST00000437681 CNPY4Q8N129 248 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 RGS20O76081 388 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 SMPD1P17405 629 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
SNHG3-202ENST00000437681 SLFN12Q8IYM2 578 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
SNHG3-202ENST00000437681 RPLP2P05387 115 aaKnown RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 COL6A1P12109 1028 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TRIM32Q13049 653 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 MTMR1Q13613 665 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 FBXO16Q8IX29 292 aaPredicted RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 MRVI1Q9Y6F6 885 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 ATG7O95352 703 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TXNP10599 105 aaKnown RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SLC26A2P50443 739 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 ARHGAP1Q07960 439 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SNX17Q15036 470 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TLK2Q86UE8 772 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SLC5A5Q92911 643 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
SNHG3-202ENST00000437681 PPFIA4O75335 1185 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 MYCLP12524 364 aaPredicted RBP13.02□□□□□ -0.32
SNHG3-202ENST00000437681 KCNA2P16389 499 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 MUTP22033 750 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 SFNP31947 248 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 KRT76Q01546 638 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 LARP1BQ659C4 914 aaKnown RBP13.02□□□□□ -0.32
SNHG3-202ENST00000437681 IL31RAQ8NI17 732 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 MROH7Q68CQ1 1323 aa13.02□□□□□ -0.32
SNHG3-202ENST00000437681 H3BQV1 296 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 ITGB5P18084 799 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 ZNF76P36508 570 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 PRPHP41219 470 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 LRRC41Q15345 812 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 MTFR1Q15390 333 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 KCNMB3Q9NPA1 279 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 TMEM260Q9NX78 707 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 EMSYQ7Z589 1322 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.33
SNHG3-202ENST00000437681 CTAGE5O15320 804 aa13.01□□□□□ -0.33
SNHG3-202ENST00000437681 LGR5O75473 907 aa13.01□□□□□ -0.33
SNHG3-202ENST00000437681 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
SNHG3-202ENST00000437681 ADCYAP1R1P41586 468 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms