RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PTGS1P23219 599 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 PRCPP42785 496 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 MCM6Q14566 821 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 CPXCR1Q8N123 301 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 LRRC15Q8TF66 581 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 MXRA8Q9BRK3 442 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 VAV3Q9UKW4 847 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 KIAA1024Q9UPX6 916 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
SGCE-205ENST00000437425 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
SGCE-205ENST00000437425 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 KIF20AO95235 890 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 EPHX2P34913 555 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 PPATQ06203 517 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 CCDC65Q8IXS2 484 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 THAP9Q9H5L6 903 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 SNCAIPQ9Y6H5 919 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 MYMKA6NI61 221 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 LRRC10BA6NIK2 292 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 NFIBO00712 420 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 GAS7O60861 476 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 PSMD10O75832 226 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 PLA2G4BP0C869 781 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 VGLL4Q14135 290 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 OTOP1Q7RTM1 612 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 LRRC8AQ8IWT6 810 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 SMYD4Q8IYR2 804 aaPredicted RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 ANKRD13AQ8IZ07 590 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 REPS2Q8NFH8 660 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
SGCE-205ENST00000437425 DDX12PQ92771 950 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 MED15Q96RN5 788 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 NUDT12Q9BQG2 462 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 TEKT3Q9BXF9 490 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 TEX13BQ9BXU2 312 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
SGCE-205ENST00000437425 PARP14Q460N5 1801 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 CXCL11O14625 94 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 TAL1P17542 331 aaPredicted RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 CCNE1P24864 410 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 EEF1GP26641 437 aaKnown RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 TMC6Q7Z403 805 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 ERO1BQ86YB8 467 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 GUF1Q8N442 669 aaKnown RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 PROCA1Q8NCQ7 364 aaPredicted RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 SAMSN1Q9NSI8 373 aaKnown RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
SGCE-205ENST00000437425 LIMA1Q9UHB6 759 aaKnown RBP17.15■□□□□ 0.34
SGCE-205ENST00000437425 POTEB3A0JP26 581 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 POTECB2RU33 542 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 MAFGO15525 162 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 STX17P56962 302 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.33
SGCE-205ENST00000437425 GPR162Q16538 588 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 POTEBQ6S5H4 581 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
SGCE-205ENST00000437425 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 P2RX5Q93086 422 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 TBC1D22BQ9NU19 505 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 MAGEC2Q9UBF1 373 aaPredicted RBP17.14■□□□□ 0.33
SGCE-205ENST00000437425 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 UBIAD1Q9Y5Z9 338 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 SCN4AP35499 1836 aa17.14■□□□□ 0.33
SGCE-205ENST00000437425 IPO5O00410 1097 aaKnown RBP17.13■□□□□ 0.33
SGCE-205ENST00000437425 MED24O75448 989 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 STAM2O75886 525 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 TPM2P07951 284 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
SGCE-205ENST00000437425 EHHADHQ08426 723 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 NR1I3Q14994 352 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 EPHA7Q15375 998 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 ECM1Q16610 540 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 CCDC144BQ3MJ40 725 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 SPECC1LQ69YQ0 1117 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
SGCE-205ENST00000437425 ARMC9Q7Z3E5 817 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms