RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 RNF207Q6ZRF8 634 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 FAM184AQ8NB25 1140 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 PPP1R13LQ8WUF5 828 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 COPS5Q92905 334 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 WNT8AQ9H1J5 351 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 ZNF576Q9H609 170 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 CXXC1Q9P0U4 656 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 MAD2L2Q9UI95 211 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 MYH7BA7E2Y1 1941 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 EDNRBP24530 442 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 PURAQ00577 322 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 PKP1Q13835 747 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 ASPRV1Q53RT3 343 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 PSRC1Q6PGN9 363 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 TRIM22Q8IYM9 498 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 OR6J1Q8NGC5 347 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 WASF1Q92558 559 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 TIFAQ96CG3 184 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 ZDHHC9Q9Y397 364 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 ARIH2O95376 493 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 DEXIO95424 95 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 CDC37Q16543 378 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 SCLYQ96I15 445 aa12.56□□□□□ -0.4
HMGCL-204ENST00000436439 TRMT13Q9NUP7 481 aaKnown RBP12.56□□□□□ -0.4
HMGCL-204ENST00000436439 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 PTPRSQ13332 1948 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-204ENST00000436439 VCANP13611 3396 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 FGBP02675 491 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 MYL3P08590 195 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 PARP1P09874 1014 aaKnown RBP12.55□□□□□ -0.4
HMGCL-204ENST00000436439 ZSCAN22P10073 491 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-204ENST00000436439 CYP2C9P11712 490 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 PDE4DQ08499 809 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
HMGCL-204ENST00000436439 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 PHKBQ93100 1093 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
HMGCL-204ENST00000436439 CHD9Q3L8U1 2897 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
HMGCL-204ENST00000436439 GOLGA6L22H0YM25 854 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 CPT1AP50416 773 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-204ENST00000436439 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 TAAR1Q96RJ0 339 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
HMGCL-204ENST00000436439 YBX2Q9Y2T7 364 aaKnown RBP12.54□□□□□ -0.4
HMGCL-204ENST00000436439 SPTBN5Q9NRC6 3674 aaKnown RBP12.53□□□□□ -0.4
HMGCL-204ENST00000436439 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 A6NJR5 290 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 NKRFO15226 690 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGCL-204ENST00000436439 F13A1P00488 732 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
HMGCL-204ENST00000436439 PKN1Q16512 942 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 QRICH1Q2TAL8 776 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-204ENST00000436439 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 C8orf76Q96K31 380 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-204ENST00000436439 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 PRDM6Q9NQX0 595 aa12.53□□□□□ -0.4
HMGCL-204ENST00000436439 ABCB11O95342 1321 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 MYO9BQ13459 2157 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 H3BQV1 296 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 CYTH3O43739 400 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 TRAK2O60296 914 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 DTNBO60941 627 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 RABGGTBP53611 331 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms