RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 RIOK1Q9BRS2 568 aaKnown RBP10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 PRDM12Q9H4Q4 367 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 VCPKMTQ9H867 229 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 MCM9Q9NXL9 1143 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 ZDHHC3Q9NYG2 299 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 MSRAQ9UJ68 235 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 FAM184BQ9ULE4 1060 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 TMX2Q9Y320 296 aa10.14□□□□□ -0.79
NIF3L1-208ENST00000436412 PLXNA1Q9UIW2 1896 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 A0A1W2PNR3 127 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 SURF6O75683 361 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 PGK2P07205 417 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 TAL1P17542 331 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 CST5P28325 142 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 STAT3P40763 770 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 CDK7P50613 346 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 CCSAPQ6IQ19 270 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 C16orf59Q7L2K0 433 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 PLEKHM2Q8IWE5 1019 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 GLT1D1Q96MS3 346 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 MTIF3Q9H2K0 278 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 CXXC1Q9P0U4 656 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 NOP58Q9Y2X3 529 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 PCDHGC4Q9Y5F7 938 aa10.13□□□□□ -0.79
NIF3L1-208ENST00000436412 SYNGAP1Q96PV0 1343 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 DUSP11O75319 330 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 TRIM27P14373 513 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 SNRPNP63162 240 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 ICA1Q05084 483 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 TTF1Q15361 905 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 KCNA10Q16322 511 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 AAK1Q2M2I8 961 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 SPICE1Q8N0Z3 855 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 SPC25Q9HBM1 224 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 RAPGEFL1Q9UHV5 662 aa10.12□□□□□ -0.79
NIF3L1-208ENST00000436412 A0A0U1RQG5 324 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 ARVCFO00192 962 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 VWA5AO00534 786 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 BACH1O14867 736 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 CSF2RAP15509 400 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 IGFBP4P22692 258 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 TXLNAP40222 546 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 TNP2Q05952 138 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 ADGRE1Q14246 886 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 FIGNL1Q6PIW4 674 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 ZNF365Q70YC5 407 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 GALNT6Q8NCL4 622 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 HERVK_113Q902F9 699 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 EAF2Q96CJ1 260 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 SEZ6LQ9BYH1 1024 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 CCDC8Q9H0W5 538 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 IL23AQ9NPF7 189 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 DCP1AQ9NPI6 582 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 TLR7Q9NYK1 1049 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 GDF2Q9UK05 429 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 PPP1R9AQ9ULJ8 1098 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 PARP14Q460N5 1801 aa10.11□□□□□ -0.79
NIF3L1-208ENST00000436412 TCF20Q9UGU0 1960 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 COL11A1P12107 1806 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 MYH8P13535 1937 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ATXN7O15265 892 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 SNAI1O95863 264 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ITGB2P05107 769 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 BMP4P12644 408 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 GJA9P57773 515 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 CLDN10P78369 228 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 CCDC85BQ15834 202 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 SLC9C2Q5TAH2 1124 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 BEND7Q8N7W2 519 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 EDARADDQ8WWZ3 215 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 VTI1AQ96AJ9 217 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ANTXR1Q9H6X2 564 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 KANSL2Q9H9L4 492 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ATP8A2Q9NTI2 1148 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 NAV1Q8NEY1 1877 aa10.1□□□□□ -0.79
NIF3L1-208ENST00000436412 ATP9BO43861 1147 aa10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 BCAR3O75815 825 aa10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 FGBP02675 491 aa10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 ASGR1P07306 291 aa10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 C6orf222P0C671 652 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 ACRP10323 421 aa10.09□□□□□ -0.79
NIF3L1-208ENST00000436412 AKR1B1P15121 316 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms