RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 USP26Q9BXU7 913 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 BCAS3Q9H6U6 928 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 MLXIPQ9HAP2 919 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 KIAA1217Q5T5P2 1943 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 TGFB3P10600 412 aa21.04■□□□□ 0.96
HMGN1-207ENST00000436324 NAPAP54920 295 aa21.04■□□□□ 0.96
HMGN1-207ENST00000436324 C16orf59Q7L2K0 433 aa21.04■□□□□ 0.96
HMGN1-207ENST00000436324 STAM2O75886 525 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 PSEN2P49810 448 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 HSDL1Q3SXM5 330 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 TMEM240Q5SV17 173 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 PCNX4Q63HM2 1172 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 TYW1BQ6NUM6 668 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 GPR153Q6NV75 609 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 ZNF365Q70YC5 407 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 SCLYQ96I15 445 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 INPP4AQ96PE3 977 aaPredicted RBP21.03■□□□□ 0.96
HMGN1-207ENST00000436324 PCDHA6Q9UN73 950 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 NOD1Q9Y239 953 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 PCDHA8Q9Y5H6 950 aa21.03■□□□□ 0.96
HMGN1-207ENST00000436324 SPDYE3A6NKU9 549 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 SPATA31C2B4DYI2 1134 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 RCAN1P53805 252 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 PTPN11Q06124 597 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-207ENST00000436324 SEMA3FQ13275 785 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 WNT8AQ9H1J5 351 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 IL23AQ9NPF7 189 aa21.02■□□□□ 0.96
HMGN1-207ENST00000436324 CCDC196A0A1B0GTZ2 297 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 STXBP3O00186 592 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 FIBPO43427 364 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 PPFIA3O75145 1194 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 ICAM3P32942 547 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 MFSD10Q14728 455 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 PTGISQ16647 500 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 GDF6Q6KF10 455 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-207ENST00000436324 XRRA1Q6P2D8 792 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 RUFY3Q7L099 469 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 CYFIP1Q7L576 1253 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 NLRX1Q86UT6 975 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 PGBD1Q96JS3 809 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 FAM161BQ96MY7 647 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 SCN10AQ9Y5Y9 1956 aa21.01■□□□□ 0.95
HMGN1-207ENST00000436324 SMCO2A6NFE2 343 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 EPB41L2O43491 1005 aaKnown RBP21■□□□□ 0.95
HMGN1-207ENST00000436324 PPFIA4O75335 1185 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 CCT2P78371 535 aaKnown RBP21■□□□□ 0.95
HMGN1-207ENST00000436324 SP4Q02446 784 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 NEDD9Q14511 834 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 KIAA0753Q2KHM9 967 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 PSRC1Q6PGN9 363 aaPredicted RBP21■□□□□ 0.95
HMGN1-207ENST00000436324 C7orf31Q8N865 590 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
HMGN1-207ENST00000436324 KATNAL1Q9BW62 490 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 ZSWIM6Q9HCJ5 1215 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 RIC8AQ9NPQ8 531 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 HDAC6Q9UBN7 1215 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 CYP46A1Q9Y6A2 500 aa21■□□□□ 0.95
HMGN1-207ENST00000436324 NOP56O00567 594 aaKnown RBP20.99■□□□□ 0.95
HMGN1-207ENST00000436324 ADCY7P51828 1080 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 PPP1R18Q6NYC8 613 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 DEFB128Q7Z7B8 93 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 RETREG2Q8NC44 543 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 AGXT2Q9BYV1 514 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 UPF3BQ9BZI7 483 aaKnown RBP20.99■□□□□ 0.95
HMGN1-207ENST00000436324 BARHL2Q9NY43 387 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 PKD2L1Q9P0L9 805 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 TELO2Q9Y4R8 837 aa20.99■□□□□ 0.95
HMGN1-207ENST00000436324 F2P00734 622 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 FGBP02675 491 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 HOXD8P13378 290 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-207ENST00000436324 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
HMGN1-207ENST00000436324 METTL7BQ6UX53 244 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 OTOP2Q7RTS6 562 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 FBXL16Q8N461 479 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 PHKBQ93100 1093 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 EHMT1Q9H9B1 1298 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
HMGN1-207ENST00000436324 TMEM260Q9NX78 707 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 MTMR10Q9NXD2 777 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 MYH7BA7E2Y1 1941 aa20.98■□□□□ 0.95
HMGN1-207ENST00000436324 hCG_1984214I3L0E3 225 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 HAS3O00219 553 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 SCG2P13521 617 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 ITGB5P18084 799 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 PDIA3P30101 505 aaKnown RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 ZNF200P98182 395 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 TOB2Q14106 344 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 PFKFB3Q16875 520 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 UTP14CQ5TAP6 766 aaKnown RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 ZNF697Q5TEC3 545 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 FAM109BQ6ICB4 259 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 SESTD1Q86VW0 696 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 RPUSD2Q8IZ73 545 aaKnown RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 ZNF713Q8N859 430 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-207ENST00000436324 GPRASP2Q96D09 838 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 C16orf70Q9BSU1 422 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 GTF2IRD1Q9UHL9 959 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 UBIAD1Q9Y5Z9 338 aa20.97■□□□□ 0.95
HMGN1-207ENST00000436324 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-207ENST00000436324 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms