RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 C2CD5Q86YS7 1000 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 COA1Q9GZY4 146 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 EHD4Q9H223 541 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 MTMR7Q9Y216 660 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 COL4A3BPQ9Y5P4 624 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 MYH10P35580 1976 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 PITPNM2Q9BZ72 1349 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 ZC3H4Q9UPT8 1303 aaKnown RBP15.13■□□□□ 0.01
COL6A3-207ENST00000433762 TDP2O95551 362 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 EIF4A3P38919 411 aaKnown RBP15.13■□□□□ 0.01
COL6A3-207ENST00000433762 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 GOLGA6L1Q8N7Z2 621 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 CCDC102AQ96A19 550 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 CCDC17Q96LX7 622 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 UBA5Q9GZZ9 404 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 JMJD4Q9H9V9 463 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
COL6A3-207ENST00000433762 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
COL6A3-207ENST00000433762 ZBTB5O15062 677 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 AKR1B10O60218 316 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 PRPF6O94906 941 aaKnown RBP15.12■□□□□ 0.01
COL6A3-207ENST00000433762 USP11P51784 963 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 SLC20A2Q08357 652 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 COASYQ13057 564 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 CCDC65Q8IXS2 484 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
COL6A3-207ENST00000433762 SUGCTQ9HAC7 445 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 JADE2Q9NQC1 790 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 DDX25Q9UHL0 483 aaKnown RBP15.12■□□□□ 0.01
COL6A3-207ENST00000433762 CYP3A7-CYP3A51PA0A087WV96 503 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 CYP3A7P24462 503 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 CYP27A1Q02318 531 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 EDRF1Q3B7T1 1238 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 FAM26FQ5R3K3 315 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
COL6A3-207ENST00000433762 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 PDE2AO00408 941 aaPredicted RBP15.11■□□□□ 0.01
COL6A3-207ENST00000433762 SRGAP2O75044 1071 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 SERPING1P05155 500 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 ANXA13P27216 316 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 MAGEA1P43355 309 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 NNTQ13423 1086 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 SLC9C1Q4G0N8 1177 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 SP8Q8IXZ3 490 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 ADGRF4Q8IZF3 695 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 HAS1Q92839 578 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 COA7Q96BR5 231 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 NOX5Q96PH1 765 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 OSBPL9Q96SU4 736 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 MMRN2Q9H8L6 949 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 POTEMA6NI47 508 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 TRIM37O94972 964 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 SYF2O95926 243 aaKnown RBP15.11■□□□□ 0.01
COL6A3-207ENST00000433762 AP3B2Q13367 1082 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 HGSNATQ68CP4 663 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 EMBQ6PCB8 327 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 RRAGAQ7L523 313 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 FAM207AQ9NSI2 230 aaPredicted RBP15.11■□□□□ 0.01
COL6A3-207ENST00000433762 POLLQ9UGP5 575 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 CAPN6Q9Y6Q1 641 aa15.11■□□□□ 0.01
COL6A3-207ENST00000433762 FRMPD2Q68DX3 1309 aaPredicted RBP15.1■□□□□ 0.01
COL6A3-207ENST00000433762 NRXN2Q9P2S2 1712 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 A6NNZ2 444 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 TBX3O15119 743 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 SERPINB2P05120 415 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 AKR1B1P15121 316 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 CAPN2P17655 700 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 PAFAH1B1P43034 410 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 TNNI2P48788 182 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 C10orf76Q5T2E6 689 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 HHIPL2Q6UWX4 724 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 DYMQ7RTS9 669 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 CACNA2D4Q7Z3S7 1137 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 TRIM59Q8IWR1 403 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 AFAP1L1Q8TED9 768 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 CAPZA3Q96KX2 299 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 SELENOOQ9BVL4 669 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 PCDHA12Q9UN75 941 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 PCDHA2Q9Y5H9 948 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 GRID2IPA4D2P6 1211 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 CES2O00748 559 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 EPHB6O15197 1021 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 N4BP1O75113 896 aaKnown RBP15.1■□□□□ 0.01
COL6A3-207ENST00000433762 RNF40O75150 1001 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 GYS1P13807 737 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 KCNMA1Q12791 1236 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
COL6A3-207ENST00000433762 SPATA4Q8NEY3 305 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 KCNMB3Q9NPA1 279 aa15.1■□□□□ 0.01
COL6A3-207ENST00000433762 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms