RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 ATP6V0A4Q9HBG4 840 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 RNF14Q9UBS8 474 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 GGA2Q9UJY4 613 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CALM1P0DP23 149 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CALM2P0DP24 149 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CALM3P0DP25 149 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 FIGNQ5HY92 759 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 RNF10Q8N5U6 811 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CUL5Q93034 780 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 AMACRQ9UHK6 382 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 ATP8A1Q9Y2Q0 1164 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 NID2Q14112 1375 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 TRIM37O94972 964 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 RCAN1P53805 252 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 HEATR3Q7Z4Q2 680 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ISCUQ9H1K1 167 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 KIF9Q9HAQ2 790 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 LRRC4CQ9HCJ2 640 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 LUC7LQ9NQ29 371 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 USP17L21D6R901 530 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 CCDC197Q8NCU1 140 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 UHMK1Q8TAS1 419 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 SLIT3O75094 1523 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 SART1O43290 800 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ANP32DO95626 131 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 XRCC4Q13426 336 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ADAT2Q7Z6V5 191 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 ANKS4BQ8N8V4 417 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 CCT6BQ92526 530 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 PNMA2Q9UL42 364 aa12.68□□□□□ -0.38
HMGCS1-202ENST00000433297 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CALRP27797 417 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 IFNAR2P48551 515 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CNNM4Q6P4Q7 775 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 NLRP10Q86W26 655 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 BAP1Q92560 729 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 TATDN2Q93075 761 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CHMP6Q96FZ7 201 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 ELAC2Q9BQ52 826 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 A0A087X0T9 212 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 KRIT1O00522 736 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 PJA2O43164 708 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 FAM228BP0C875 321 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CALML3P27482 149 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 BIRC3Q13489 604 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 FAM133AQ8N9E0 248 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CCT8L1PA6NM43 557 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 MGRN1O60291 552 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 KLHL30Q0D2K2 578 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 MEI1Q5TIA1 1274 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 STK38LQ9Y2H1 464 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
HMGCS1-202ENST00000433297 H0YGN5 161 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 LCA5LO95447 670 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 NAB2Q15742 525 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 TLDC1Q6P9B6 456 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 TAX1BP1Q86VP1 789 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 PSMD1Q99460 953 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 NFS1Q9Y697 457 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 ITGA4P13612 1032 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 AMPD3Q01432 767 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 PRPF4BQ13523 1007 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 FAM83BQ5T0W9 1011 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 GLIS3Q8NEA6 775 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 MTA3Q9BTC8 594 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 TBC1D7Q9P0N9 293 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
HMGCS1-202ENST00000433297 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 F8W031 263 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms