RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
NUP50-209ENST00000432340 MAF1Q9H063 256 aa18.62■□□□□ 0.57
NUP50-209ENST00000432340 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
NUP50-209ENST00000432340 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
NUP50-209ENST00000432340 STX8Q9UNK0 236 aa18.62■□□□□ 0.57
NUP50-209ENST00000432340 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 RGS20O76081 388 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 F2P00734 622 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 SNAP25P60880 206 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 TFAP4Q01664 338 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 SLFNL1Q499Z3 407 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 NAALADL2Q58DX5 795 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 CCDC62Q6P9F0 684 aa18.61■□□□□ 0.57
NUP50-209ENST00000432340 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
NUP50-209ENST00000432340 CACNA1BQ00975 2339 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 APPP05067 770 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 RPS6P62753 249 aaKnown RBP18.6■□□□□ 0.57
NUP50-209ENST00000432340 ARHGAP1Q07960 439 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 SERINC5Q86VE9 423 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 UBALD2Q8IYN6 164 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 DCAF4Q8WV16 495 aa18.6■□□□□ 0.57
NUP50-209ENST00000432340 EMID1Q96A84 441 aaPredicted RBP18.6■□□□□ 0.57
NUP50-209ENST00000432340 SRGAP2BP0DMP2 458 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 SLC30A10Q6XR72 485 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 PPTC7Q8NI37 304 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 CLP1Q92989 425 aaKnown RBP18.59■□□□□ 0.57
NUP50-209ENST00000432340 P2RX5Q93086 422 aa18.59■□□□□ 0.57
NUP50-209ENST00000432340 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
NUP50-209ENST00000432340 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.57
NUP50-209ENST00000432340 HAS3O00219 553 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 LINC01565O15544 149 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 ARIH2O95376 493 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 STXBP2Q15833 593 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 SYDE2Q5VT97 1194 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 SEPT14Q6ZU15 432 aa18.58■□□□□ 0.56
NUP50-209ENST00000432340 PPFIA4O75335 1185 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 GTF2F1P35269 517 aaKnown RBP eCLIP18.57■□□□□ 0.562e-6■■■■□ 26
NUP50-209ENST00000432340 BTG3Q14201 252 aaPredicted RBP18.57■□□□□ 0.56
NUP50-209ENST00000432340 LY6KQ17RY6 165 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 BTNL9Q6UXG8 535 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 FRMD5Q7Z6J6 570 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 RGS22Q8NE09 1264 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 NSUN6Q8TEA1 469 aaKnown RBP18.57■□□□□ 0.56
NUP50-209ENST00000432340 IWS1Q96ST2 819 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 CLEC1BQ9P126 229 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 PLAGL2Q9UPG8 496 aa18.57■□□□□ 0.56
NUP50-209ENST00000432340 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.56■□□□□ 0.56
NUP50-209ENST00000432340 TSPY2A6NKD2 308 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 HMMRO75330 724 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 GNAT1P11488 350 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 MTMR3Q13615 1198 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 PUM1Q14671 1186 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUP50-209ENST00000432340 CLEC4DQ8WXI8 215 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 ATP6V0A1Q93050 837 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 CHMP4CQ96CF2 233 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 PTPRSQ13332 1948 aa18.56■□□□□ 0.56
NUP50-209ENST00000432340 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
NUP50-209ENST00000432340 RAB11FIP3O75154 756 aa18.55■□□□□ 0.56
NUP50-209ENST00000432340 APPBP2Q92624 585 aa18.55■□□□□ 0.56
NUP50-209ENST00000432340 WNT8BQ93098 351 aa18.55■□□□□ 0.56
NUP50-209ENST00000432340 GVINP1Q7Z2Y8 2422 aa18.55■□□□□ 0.56
NUP50-209ENST00000432340 MED19A0JLT2 244 aaPredicted RBP18.54■□□□□ 0.56
NUP50-209ENST00000432340 ZFYP08048 801 aaPredicted RBP18.54■□□□□ 0.56
NUP50-209ENST00000432340 ZNF286BP0CG31 522 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 ASTLQ6HA08 431 aaPredicted RBP18.54■□□□□ 0.56
NUP50-209ENST00000432340 KCNV1Q6PIU1 500 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 NEK1Q96PY6 1258 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 CDCA3Q99618 268 aaPredicted RBP18.54■□□□□ 0.56
NUP50-209ENST00000432340 MFSD1Q9H3U5 465 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 NR2E1Q9Y466 385 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
NUP50-209ENST00000432340 BAZ2AQ9UIF9 1905 aaKnown RBP18.54■□□□□ 0.56
NUP50-209ENST00000432340 CSPG5O95196 566 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 HOXD8P13378 290 aaPredicted RBP18.53■□□□□ 0.56
NUP50-209ENST00000432340 NRIP1P48552 1158 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 ZNF200P98182 395 aaPredicted RBP18.53■□□□□ 0.56
NUP50-209ENST00000432340 SUSD6Q92537 303 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 BCL11AQ9H165 835 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 TLE6Q9H808 572 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 DDX41Q9UJV9 622 aaKnown RBP18.53■□□□□ 0.56
NUP50-209ENST00000432340 BARX2Q9UMQ3 279 aaPredicted RBP18.53■□□□□ 0.56
NUP50-209ENST00000432340 SORCS3Q9UPU3 1222 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
NUP50-209ENST00000432340 PATL2C9JE40 543 aaKnown RBP18.52■□□□□ 0.56
NUP50-209ENST00000432340 GPAA1O43292 621 aa18.52■□□□□ 0.56
NUP50-209ENST00000432340 EIF3JO75822 258 aaKnown RBP18.52■□□□□ 0.56
NUP50-209ENST00000432340 SLC16A2P36021 539 aa18.52■□□□□ 0.56
NUP50-209ENST00000432340 CLCN5P51795 746 aa18.52■□□□□ 0.56
NUP50-209ENST00000432340 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
NUP50-209ENST00000432340 KRT37O76014 449 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 CHGBP05060 677 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 CTSHP09668 335 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms