RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 ACTN1P12814 892 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 SELPP16109 830 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 UBA1P22314 1058 aaKnown RBP16.54■□□□□ 0.24
SEC13-212ENST00000432213 ANTXR2P58335 489 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
SEC13-212ENST00000432213 GRM4Q14833 912 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 PGM5Q15124 567 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 TTC22Q5TAA0 569 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 MCF2L2Q86YR7 1114 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 GDPD5Q8WTR4 605 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 EMID1Q96A84 441 aaPredicted RBP16.54■□□□□ 0.24
SEC13-212ENST00000432213 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
SEC13-212ENST00000432213 UBAC1Q9BSL1 405 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 KRT23Q9C075 422 aa16.54■□□□□ 0.24
SEC13-212ENST00000432213 LOXHD1Q8IVV2 1947 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 ZBTB5O15062 677 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
SEC13-212ENST00000432213 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
SEC13-212ENST00000432213 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 DGKDQ16760 1214 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
SEC13-212ENST00000432213 CAGE1Q8TC20 777 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 PHOSPHO2Q8TCD6 241 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 AFAP1L1Q8TED9 768 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 PCDHA1Q9Y5I3 950 aa16.53■□□□□ 0.24
SEC13-212ENST00000432213 B4DLN1 442 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 GGPS1O95749 300 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 CASTP20810 708 aaKnown RBP16.52■□□□□ 0.24
SEC13-212ENST00000432213 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
SEC13-212ENST00000432213 CCDC178Q5BJE1 867 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
SEC13-212ENST00000432213 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 PIBF1Q8WXW3 757 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
SEC13-212ENST00000432213 KIAA1671Q9BY89 1806 aa16.52■□□□□ 0.23
SEC13-212ENST00000432213 COL4A6Q14031 1691 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 HIP1O00291 1037 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 TLL1O43897 1013 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 BAIAP3O94812 1187 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 COL9A1P20849 921 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
SEC13-212ENST00000432213 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
SEC13-212ENST00000432213 AAMPQ13685 434 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 SKIV2LQ15477 1246 aaKnown RBP16.51■□□□□ 0.23
SEC13-212ENST00000432213 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 DHX37Q8IY37 1157 aaKnown RBP16.51■□□□□ 0.23
SEC13-212ENST00000432213 C7orf31Q8N865 590 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEC13-212ENST00000432213 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
SEC13-212ENST00000432213 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
SEC13-212ENST00000432213 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 CHMLP26374 656 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 TROAPQ12815 778 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 PTK7Q13308 1070 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 TRIM50Q86XT4 487 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 SPATA33Q96N06 139 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 MAF1Q9H063 256 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 RALGAPA2Q2PPJ7 1873 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
SEC13-212ENST00000432213 LINC01553A4QN01 128 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 E7EWF7 191 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 HOXC8P31273 242 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 KCNJ6P48051 423 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
SEC13-212ENST00000432213 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
SEC13-212ENST00000432213 LGR5O75473 907 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 GJB5O95377 273 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 LGALS2P05162 132 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 NT5C2P49902 561 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 SERINC5Q86VE9 423 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
SEC13-212ENST00000432213 RTEL1Q9NZ71 1219 aa16.48■□□□□ 0.23
SEC13-212ENST00000432213 TREHO43280 583 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 SMIM10L2AP0DMW4 78 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 SMIM10L2BP0DMW5 78 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 THPOP40225 353 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
SEC13-212ENST00000432213 DBF4BQ8NFT6 615 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 IGDCC4Q8TDY8 1250 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 C17orf80Q9BSJ5 609 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 CD320Q9NPF0 282 aa16.47■□□□□ 0.23
SEC13-212ENST00000432213 GCOM1H8Y6P7 765 aaPredicted RBP16.46■□□□□ 0.23
SEC13-212ENST00000432213 SGSM2O43147 1006 aa16.46■□□□□ 0.23
SEC13-212ENST00000432213 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
SEC13-212ENST00000432213 CTSHP09668 335 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms