RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GNPTABQ3T906 1256 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 LDLRAD1Q5T700 205 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 SOGA3Q5TF21 947 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 SLFN13Q68D06 897 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 HEATR6Q6AI08 1181 aaKnown RBP3.38□□□□□ -1.87
CDC40-204ENST00000431461 ADAT2Q7Z6V5 191 aaKnown RBP3.38□□□□□ -1.87
CDC40-204ENST00000431461 DNAJC10Q8IXB1 793 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 ADCY4Q8NFM4 1077 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 OR6P1Q8NGX9 317 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 RASGRP4Q8TDF6 673 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 SEC14L1Q92503 715 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 COPS5Q92905 334 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 WWC2-AS2Q96NR7 200 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 AP5M1Q9H0R1 490 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 CSRNP2Q9H175 543 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 INPP5FQ9Y2H2 1132 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 B4GALT4O60513 344 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 SLC6A11P48066 632 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 CSRP2Q16527 193 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 HS1BP3Q53T59 392 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 FBXW10Q5XX13 1052 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 PKN3Q6P5Z2 889 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 ARHGEF18Q6ZSZ5 1173 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 FAM126BQ8IXS8 530 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 DPF3Q92784 378 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 VOPP1Q96AW1 172 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 GPRASP2Q96D09 838 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 MBD6Q96DN6 1003 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 ZNF503Q96F45 646 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 IKZF4Q9H2S9 585 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 PHAXQ9H814 394 aaKnown RBP3.37□□□□□ -1.87
CDC40-204ENST00000431461 DLL4Q9NR61 685 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 BTG4Q9NY30 223 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 MARCH2Q9P0N8 246 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 CGGBP1Q9UFW8 167 aaPredicted RBP3.37□□□□□ -1.87
CDC40-204ENST00000431461 PPT2Q9UMR5 302 aa3.37□□□□□ -1.87
CDC40-204ENST00000431461 ZNF202O95125 648 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 EPHX1P07099 455 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 IL13P35225 146 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 NKX3-2P78367 333 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 DGCR2P98153 550 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 SLC7A5Q01650 507 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 ARID5AQ03989 594 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 ADAM9Q13443 819 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 CR1LQ2VPA4 569 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 NRN1LQ496H8 165 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 MBLAC2Q68D91 279 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 MILR1Q7Z6M3 343 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 RIOX2Q8IUF8 465 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 SCUBE1Q8IWY4 988 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 ZNF428Q96B54 188 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 FGD4Q96M96 766 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 YTHDC1Q96MU7 727 aaKnown RBP3.36□□□□□ -1.87
CDC40-204ENST00000431461 GNRHR2Q96P88 292 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 TRIM8Q9BZR9 551 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 TMEM168Q9H0V1 697 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 ZDHHC9Q9Y397 364 aa3.36□□□□□ -1.87
CDC40-204ENST00000431461 A0A087X1B8 175 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 A0A1W2PQH9 124 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 C22orf46C9J442 243 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 CYP7B1O75881 506 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 THBDP07204 575 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 PLS3P13797 630 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 TNNI3KQ59H18 835 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 MROH9Q5TGP6 573 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 IQCEQ6IPM2 695 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 KBTBD2Q8IY47 623 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 ZNF513Q8N8E2 541 aaPredicted RBP3.35□□□□□ -1.87
CDC40-204ENST00000431461 C19orf47Q8N9M1 422 aaKnown RBP3.35□□□□□ -1.87
CDC40-204ENST00000431461 SREK1Q8WXA9 508 aaKnown RBP3.35□□□□□ -1.87
CDC40-204ENST00000431461 KLHL6Q8WZ60 621 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 CRAMP1Q96RY5 1269 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 CRBNQ96SW2 442 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 GMLQ99445 158 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 L2HGDHQ9H9P8 463 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 GPRC5CQ9NQ84 441 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 CLEC1BQ9P126 229 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 CROTQ9UKG9 612 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 ZFR2Q9UPR6 939 aaKnown RBP3.35□□□□□ -1.87
CDC40-204ENST00000431461 AKT3Q9Y243 479 aa3.35□□□□□ -1.87
CDC40-204ENST00000431461 SOX9P48436 509 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 MLLT6P55198 1093 aaPredicted RBP3.34□□□□□ -1.87
CDC40-204ENST00000431461 SCRN1Q12765 414 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 PAK2Q13177 524 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 PRKD1Q15139 912 aaPredicted RBP3.34□□□□□ -1.87
CDC40-204ENST00000431461 INF2Q27J81 1249 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 ZNF394Q53GI3 561 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 NAALADL2Q58DX5 795 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 NBPF6Q5VWK0 638 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 DPY19L2P1Q6NXN4 242 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 RNF207Q6ZRF8 634 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 TEX2Q8IWB9 1127 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 Q8N1Y9 231 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 Q8TCH9 128 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 NEU4Q8WWR8 484 aaPredicted RBP3.34□□□□□ -1.87
CDC40-204ENST00000431461 ZG16BQ96DA0 208 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 NBPF4Q96M43 638 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 ADOQ96SZ5 270 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 HIRIP3Q9BW71 556 aaPredicted RBP3.34□□□□□ -1.87
CDC40-204ENST00000431461 PCDHB10Q9UN67 800 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms