RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 KMT5AQ9NQR1 393 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 DISC1Q9NRI5 854 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 KANSL3Q9P2N6 904 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 CLCA2Q9UQC9 943 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 HNRNPDLO14979 420 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 SUN1O94901 812 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 ASMTLO95671 621 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 OR52Z1P0C646 297 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 VCLP18206 1134 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 PDIA3P30101 505 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TEAD4Q15561 434 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 NME8Q8N427 588 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 PPFIBP2Q8ND30 876 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TDRD7Q8NHU6 1098 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 IL17RAQ96F46 866 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TSPY26PQ9H489 355 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 SMARCAD1Q9H4L7 1026 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TBC1D22BQ9NU19 505 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 USP18Q9UMW8 372 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 ZC3H4Q9UPT8 1303 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 INPP4BO15327 924 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 SART1O43290 800 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 ENTPD3O75355 529 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 AKR1A1P14550 325 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 GCFC2P16383 781 aaKnown RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 HIRAP54198 1017 aaPredicted RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 EPHB3P54753 998 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 COG7P83436 770 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 KRT76Q01546 638 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 LAMC2Q13753 1193 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TNNI3KQ59H18 835 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF557Q8N988 423 aaPredicted RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 BRF1Q92994 677 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 NAP1L3Q99457 506 aaPredicted RBP4.93□□□□□ -1.62
LRRK2-204ENST00000430804 JRKLQ9Y4A0 524 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TACC3Q9Y6A5 838 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 NDUFB9Q9Y6M9 179 aa4.93□□□□□ -1.62
LRRK2-204ENST00000430804 TMEM110-MUSTN1A8MSY1 372 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 TLL1O43897 1013 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 F13A1P00488 732 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 GH2P01242 217 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ITGA4P13612 1032 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ARL4AP40617 200 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ALCAMQ13740 583 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MAPK6Q16659 721 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RCSD1Q6JBY9 416 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RINT1Q6NUQ1 792 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SCYL2Q6P3W7 929 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 DEFB128Q7Z7B8 93 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 POMGNT1Q8WZA1 660 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RMDN3Q96TC7 470 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RPAP3Q9H6T3 665 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ERBB3P21860 1342 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PLSCR1O15162 318 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 STRNO43815 780 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MARK3P27448 753 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SRSF11Q05519 484 aaKnown RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RAPGEF1Q13905 1077 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 IQCB1Q15051 598 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 LRRC69Q6ZNQ3 347 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MCPH1Q8NEM0 835 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 C1QTNF7Q9BXJ2 289 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PPP1R12CQ9BZL4 782 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 DEFB129Q9H1M3 183 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF536O15090 1300 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 NCOA3Q9Y6Q9 1424 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PRDM1O75626 825 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF189O75820 626 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 TMCC1O94876 653 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 GNA14O95837 355 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SFNP31947 248 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 CTNNB1P35222 781 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 TPD52P55327 224 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PSRC1Q6PGN9 363 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 CCDC110Q8TBZ0 833 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MTG1Q9BT17 334 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 CPA4Q9UI42 421 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF532Q9HCE3 1301 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 KLRF2D3W0D1 207 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SPOPO43791 374 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MAGEC1O60732 1142 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 FGBP02675 491 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 GJB1P08034 283 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PPM1AP35813 382 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PIK3CAP42336 1068 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ARID5BQ14865 1188 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SUZ12Q15022 739 aaKnown RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ANKRD23Q86SG2 305 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 FAM178BQ8IXR5 827 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 FAM177A1Q8N128 213 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 AHCYL2Q96HN2 611 aaKnown RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF302Q9NR11 478 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PCDHB11Q9Y5F2 797 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SAMD9Q5K651 1589 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MYMKA6NI61 221 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 DYNC1I1O14576 645 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 GPAA1O43292 621 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 PPFIA2O75334 1257 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms