RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SMAD3P84022 425 aaKnown RBP19.52■□□□□ 0.72
UBE3D-204ENST00000430071 APOBRQ0VD83 1088 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 BRDTQ58F21 947 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-204ENST00000430071 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 APOA5Q6Q788 366 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 TMTC3Q6ZXV5 915 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 SAMD3Q8N6K7 520 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 FANCBQ8NB91 859 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 IL23AQ9NPF7 189 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 RTEL1Q9NZ71 1219 aa19.52■□□□□ 0.72
UBE3D-204ENST00000430071 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 KLF18A0A0U1RQI7 1052 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 ZNF286BP0CG31 522 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 HSDL1Q3SXM5 330 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 MYSM1Q5VVJ2 828 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 DHX37Q8IY37 1157 aaKnown RBP19.51■□□□□ 0.71
UBE3D-204ENST00000430071 SEMA6BQ9H3T3 888 aa19.51■□□□□ 0.71
UBE3D-204ENST00000430071 CHD7Q9P2D1 2997 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 KPNA6O60684 536 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 GGPS1O95749 300 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 UBA1P22314 1058 aaKnown RBP19.5■□□□□ 0.71
UBE3D-204ENST00000430071 CCND2P30279 289 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 PBX2P40425 430 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 GNAQP50148 359 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 NEK4P51957 841 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 UBE2SQ16763 222 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 ZNF697Q5TEC3 545 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 GDF6Q6KF10 455 aaPredicted RBP19.5■□□□□ 0.71
UBE3D-204ENST00000430071 NFRKBQ6P4R8 1299 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 LZTS2Q9BRK4 669 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
UBE3D-204ENST00000430071 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 SEZ6LQ9BYH1 1024 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 FAM217BQ9NTX9 383 aaPredicted RBP19.5■□□□□ 0.71
UBE3D-204ENST00000430071 CNTNAP5Q8WYK1 1306 aa19.5■□□□□ 0.71
UBE3D-204ENST00000430071 FUT2Q10981 343 aa19.49■□□□□ 0.71
UBE3D-204ENST00000430071 TRAF1Q13077 416 aa19.49■□□□□ 0.71
UBE3D-204ENST00000430071 HIC1Q14526 733 aa19.49■□□□□ 0.71
UBE3D-204ENST00000430071 CELF3Q5SZQ8 465 aaKnown RBP19.49■□□□□ 0.71
UBE3D-204ENST00000430071 OTOP2Q7RTS6 562 aa19.49■□□□□ 0.71
UBE3D-204ENST00000430071 EMID1Q96A84 441 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-204ENST00000430071 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
UBE3D-204ENST00000430071 WDR81Q562E7 1941 aa19.49■□□□□ 0.71
UBE3D-204ENST00000430071 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
UBE3D-204ENST00000430071 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
UBE3D-204ENST00000430071 CALM1P0DP23 149 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 CALM2P0DP24 149 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 CALM3P0DP25 149 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 CDC27P30260 824 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 PSEN2P49810 448 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 EVCP57679 992 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 ZNF200P98182 395 aaPredicted RBP19.48■□□□□ 0.71
UBE3D-204ENST00000430071 LAMC2Q13753 1193 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 DGKDQ16760 1214 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 TYW1BQ6NUM6 668 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 PPTC7Q8NI37 304 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 SMARCC2Q8TAQ2 1214 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 DHX38Q92620 1227 aaKnown RBP19.48■□□□□ 0.71
UBE3D-204ENST00000430071 HDAC6Q9UBN7 1215 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 STXBP5LQ9Y2K9 1186 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 LOXHD1Q8IVV2 1947 aa19.48■□□□□ 0.71
UBE3D-204ENST00000430071 GOLGA8BA8MQT2 603 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 HAS3O00219 553 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 ZBTB43O43298 467 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 FGBP02675 491 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 DNAJB2P25686 324 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 AK2P54819 239 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 DEFB128Q7Z7B8 93 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 HERVK_113Q902F9 699 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 SPATA33Q96N06 139 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 INPP4AQ96PE3 977 aaPredicted RBP19.47■□□□□ 0.71
UBE3D-204ENST00000430071 CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
UBE3D-204ENST00000430071 NAP1L2Q9ULW6 460 aaPredicted RBP19.47■□□□□ 0.71
UBE3D-204ENST00000430071 UNC80Q8N2C7 3258 aa19.47■□□□□ 0.71
UBE3D-204ENST00000430071 PIK3CDO00329 1044 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 SUPT20HL2P0C7V6 817 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
UBE3D-204ENST00000430071 PTGISQ16647 500 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 PSRC1Q6PGN9 363 aaPredicted RBP19.46■□□□□ 0.71
UBE3D-204ENST00000430071 MYLIPQ8WY64 445 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 WNT8BQ93098 351 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 PSTPIP2Q9H939 334 aa19.46■□□□□ 0.71
UBE3D-204ENST00000430071 GOLGA8AA7E2F4 631 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 SPATA31C2B4DYI2 1134 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 F2P00734 622 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 PDIA3P30101 505 aaKnown RBP19.45■□□□□ 0.7
UBE3D-204ENST00000430071 ICAM3P32942 547 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 RCAN1P53805 252 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 PTPN11Q06124 597 aaPredicted RBP19.45■□□□□ 0.7
UBE3D-204ENST00000430071 MFSD10Q14728 455 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 GPNMBQ14956 572 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 KIAA0753Q2KHM9 967 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 HEATR3Q7Z4Q2 680 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 C16orf70Q9BSU1 422 aa19.45■□□□□ 0.7
UBE3D-204ENST00000430071 PBX4Q9BYU1 374 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms