RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 TMEM105Q8N8V8 129 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 COPS5Q92905 334 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 RIPOR3Q96MK2 946 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 TBC1D32Q96NH3 1257 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
ATG4B-211ENST00000429899 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-211ENST00000429899 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
ATG4B-211ENST00000429899 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
ATG4B-211ENST00000429899 LGR5O75473 907 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 ADD2P35612 726 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 RBL2Q08999 1139 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-211ENST00000429899 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
ATG4B-211ENST00000429899 WNT8BQ93098 351 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
ATG4B-211ENST00000429899 MYH6P13533 1939 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 A6NJR5 290 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 GRM6O15303 877 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 EPB41L2O43491 1005 aaKnown RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 REC8O95072 547 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 MBD4O95243 580 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 AMHP03971 560 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 ALAS1P13196 640 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 RASA1P20936 1047 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 SNAP25P60880 206 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 ZBTB33Q86T24 672 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 APPBP2Q92624 585 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 MSLNLQ96KJ4 702 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.522e-6■■□□□ 13.4
ATG4B-211ENST00000429899 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
ATG4B-211ENST00000429899 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
ATG4B-211ENST00000429899 M0R2C6 588 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 UPP2O95045 317 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 EYA4O95677 639 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 ICAM3P32942 547 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 CTNNB1P35222 781 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 ADAM15Q13444 863 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 CTR9Q6PD62 1173 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
ATG4B-211ENST00000429899 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
ATG4B-211ENST00000429899 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
ATG4B-211ENST00000429899 DOCK5Q9H7D0 1870 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 KPNA6O60684 536 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 PARNO95453 639 aaKnown RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 BRDTQ58F21 947 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 NSMFQ6X4W1 530 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 SESTD1Q86VW0 696 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 KAT2BQ92831 832 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 C22orf23Q9BZE7 217 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 ANO2Q9NQ90 1003 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 CLEC1BQ9P126 229 aa11.8□□□□□ -0.52
ATG4B-211ENST00000429899 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-211ENST00000429899 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 TTC3P53804 2025 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 FOXP2O15409 715 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 BMP3P12645 472 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 TKFCQ3LXA3 575 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 MKL1Q969V6 931 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 PCDHGC5Q9Y5F6 944 aa11.79□□□□□ -0.52
ATG4B-211ENST00000429899 ARIH2O95376 493 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-211ENST00000429899 PTH1RQ03431 593 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 CAMK1Q14012 370 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms