RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 SDR42E1Q8WUS8 393 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 PRCCQ92733 491 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 PACSIN1Q9BY11 444 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 GREM2Q9H772 168 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 CYP2D7A0A087X1C5 515 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 ASTE1Q2TB18 679 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 AP1ARQ63HQ0 302 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 CABLES1Q8TDN4 633 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 BAP1Q92560 729 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 CHMP6Q96FZ7 201 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 TMEM60Q9H2L4 133 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 RNF14Q9UBS8 474 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 PNMA2Q9UL42 364 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 AGAP1Q9UPQ3 857 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 MYH7BA7E2Y1 1941 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 KCNK3O14649 394 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 PAEPP09466 180 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 MYBP10242 640 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 KCNJ2P63252 427 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 ARID5AQ03989 594 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 DNAAF5Q86Y56 855 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM114A1Q8IWE2 563 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 SPICE1Q8N0Z3 855 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 SAAL1Q96ER3 474 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 CALR3Q96L12 384 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM205AQ6ZU69 1335 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 KLHL33A6NCF5 533 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 A8MUI8 341 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 DAPK3O43293 454 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 CLSTN1O94985 981 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 UBA7P41226 1012 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 ASIC1P78348 528 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 SNX1Q13596 522 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 THEMIS2Q5TEJ8 643 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 MEI1Q5TIA1 1274 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 HGSNATQ68CP4 663 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 LRRC45Q96CN5 670 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 NACAP1Q9BZK3 213 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 MEGF6O75095 1541 aa12.17□□□□□ -0.46
SEMA4D-209ENST00000429836 BICDL2A1A5D9 508 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 PDXDC1Q6P996 788 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 MAEAQ7L5Y9 396 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SPATA5Q8NB90 893 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 DCAF5Q96JK2 942 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SLC12A4Q9UP95 1085 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 CEP104O60308 925 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SMNDC1O75940 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 MYBL1P10243 752 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 MAP3K12Q12852 859 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 RASGRF1Q13972 1273 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 STAG2Q8N3U4 1231 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 PSMD1Q99460 953 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 ELAC2Q9BQ52 826 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SMIM23A6NLE4 172 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 P3H4Q92791 437 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms