RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 POLR3CQ9BUI4 534 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 DNAJC12Q9UKB3 198 aa8.17□□□□□ -1.1
SYNPO2-202ENST00000429713 NEO1Q92859 1461 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SHOX2O60902 331 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 PDXDC1Q6P996 788 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ZC3H18Q86VM9 953 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 LSM14AQ8ND56 463 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 NSMCE1Q8WV22 266 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ADGRB3O60242 1522 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 HOXC9P31274 260 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 LSP1P33241 339 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 USP14P54578 494 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 DNAJC9Q8WXX5 260 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 PACSIN2Q9UNF0 486 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 PFKFB2O60825 505 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 STK10O94804 968 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 POLE2P56282 527 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 NUP107P57740 925 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SCN8AQ9UQD0 1980 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 E7EWF7 191 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ATP2C2O75185 946 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ARID5AQ03989 594 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ANKRD23Q86SG2 305 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 UBLCP1Q8WVY7 318 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 VPS16Q9H269 839 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SYNPO2Q9UMS6 1093 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 CPSF1Q10570 1443 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 POLD1P28340 1107 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SKOR1P84550 965 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SEL1L2Q5TEA6 688 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 SSH3Q8TE77 659 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ATP2A3Q93084 1043 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 AATFQ9NY61 560 aaKnown RBP eCLIP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 RARS2Q5T160 578 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ARL2BPQ9Y2Y0 163 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 PASKQ96RG2 1323 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 HOXC8P31273 242 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 GABPB2Q8TAK5 448 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 ABCF3Q9NUQ8 709 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 NFE2L3Q9Y4A8 694 aa8.16□□□□□ -1.1
SYNPO2-202ENST00000429713 RSPH10B2B2RC85 870 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 H7C1D1 291 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 NPTXRO95502 500 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 RSPH10BP0C881 870 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CALM1P0DP23 149 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CALM2P0DP24 149 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CALM3P0DP25 149 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 PPP2R2AP63151 447 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 STX3Q13277 289 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 METTL22Q9BUU2 404 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 SLITRK6Q9H5Y7 841 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 NCKAP5LQ9HCH0 1330 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 MATN2O00339 956 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 IDH3BO43837 385 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 PLCD1P51178 756 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CENPUQ71F23 418 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 PHKBQ93100 1093 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CDC5LQ99459 802 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CRNKL1Q9BZJ0 848 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 RWDD3Q9Y3V2 267 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 KDM6AO15550 1401 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 THAP12O43422 761 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 ASIC1P78348 528 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 GRM1Q13255 1194 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 DZIP3Q86Y13 1208 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 SIKE1Q9BRV8 207 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CNGB3Q9NQW8 809 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 STX8Q9UNK0 236 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 MLH3Q9UHC1 1453 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 DEXIO95424 95 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 ZNF274Q96GC6 653 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 NUDCD1Q96RS6 583 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 ZMYND8Q9ULU4 1186 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 VHLP40337 213 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 PTK2BQ14289 1009 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 RSRC2Q7L4I2 434 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 PACS2Q86VP3 889 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 UNC5CLQ8IV45 518 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 MYOCDQ8IZQ8 938 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 TSNARE1Q96NA8 513 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 LRRC37BQ96QE4 947 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 CNPY3Q9BT09 278 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 YIPF3Q9GZM5 350 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 C19orf44Q9H6X5 657 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms