RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NDUFB10O96000 172 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 BMP3P12645 472 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 CHRNA5P30532 468 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 ARHGAP25P42331 645 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 CLCN6P51797 869 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
THBS3-202ENST00000428962 VWA3BQ502W6 1294 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 RSRC2Q7L4I2 434 aaKnown RBP15.22■□□□□ 0.03
THBS3-202ENST00000428962 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
THBS3-202ENST00000428962 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 SLC35F6Q8N357 371 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 C7orf43Q8WVR3 580 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 CHP1Q99653 195 aa15.22■□□□□ 0.03
THBS3-202ENST00000428962 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
THBS3-202ENST00000428962 MEIS2O14770 477 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 SLURP2P0DP57 97 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 ARHGAP4P98171 946 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 Q4G0T1 1027 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 FAM26FQ5R3K3 315 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 TEX35Q5T0J7 233 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 BTNL9Q6UXG8 535 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 PANK4Q9NVE7 773 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 PSME4Q14997 1843 aa15.21■□□□□ 0.03
THBS3-202ENST00000428962 A0A0U1RQJ8 604 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 POTEB2H3BUK9 544 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 GH2P01242 217 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 PLA2G4BP0C869 781 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 SREBF1P36956 1147 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 MMP14P50281 582 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 WHAMMP3Q1A5X7 153 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 SHROOM1Q2M3G4 852 aaPredicted RBP15.2■□□□□ 0.02
THBS3-202ENST00000428962 WDR59Q6PJI9 974 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 ATRIPQ8WXE1 791 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 DNAJC19Q96DA6 116 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 EIF3CLB5ME19 914 aaKnown RBP15.2■□□□□ 0.02
THBS3-202ENST00000428962 KRT86O43790 486 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
THBS3-202ENST00000428962 ECM1Q16610 540 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 KIAA1328Q86T90 577 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 EIF3CQ99613 913 aaKnown RBP15.2■□□□□ 0.02
THBS3-202ENST00000428962 KIAA1024Q9UPX6 916 aa15.2■□□□□ 0.02
THBS3-202ENST00000428962 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 GNA14O95837 355 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
THBS3-202ENST00000428962 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 GPBP1Q86WP2 473 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 ETNPPLQ8TBG4 499 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 CEP63Q96MT8 703 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 TSGA10Q9BZW7 698 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 NHEJ1Q9H9Q4 299 aaPredicted RBP15.19■□□□□ 0.02
THBS3-202ENST00000428962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
THBS3-202ENST00000428962 AGPAT5Q9NUQ2 364 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 HDAC9Q9UKV0 1011 aa15.19■□□□□ 0.02
THBS3-202ENST00000428962 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
THBS3-202ENST00000428962 RASSF10A6NK89 507 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 HNRNPH3P31942 346 aaKnown RBP15.18■□□□□ 0.02
THBS3-202ENST00000428962 KLK7P49862 253 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 USH1GQ495M9 461 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 PRR16Q569H4 304 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 GOPCQ9HD26 462 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 ZNF446Q9NWS9 450 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 FAM53CQ9NYF3 392 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 GUCA1BQ9UMX6 200 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 COL4A3BPQ9Y5P4 624 aa15.18■□□□□ 0.02
THBS3-202ENST00000428962 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 POTECB2RU33 542 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 E9PMD0 336 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 PSMD14O00487 310 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 KRT18P05783 430 aaKnown RBP15.17■□□□□ 0.02
THBS3-202ENST00000428962 CIITAP33076 1130 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 STAT2P52630 851 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 HERVK_113P62684 666 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 ZCWPW2Q504Y3 356 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 CCDC122Q5T0U0 273 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 GJA10Q969M2 543 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 PRMT6Q96LA8 375 aaPredicted RBP15.17■□□□□ 0.02
THBS3-202ENST00000428962 EDEM3Q9BZQ6 932 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 YDJCA8MPS7 323 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 SPA17Q15506 151 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms