RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MAD2L2Q9UI95 211 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 MTUS1Q9ULD2 1270 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 BAIAP3O94812 1187 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 MBTPS1Q14703 1052 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 TRIM71Q2Q1W2 868 aaKnown RBP19.26■□□□□ 0.67
VARS-216ENST00000428445 HSDL1Q3SXM5 330 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 ZNF618Q5T7W0 954 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 CCDC155Q8N6L0 562 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 GDPD5Q8WTR4 605 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 PDCD2LQ9BRP1 358 aa19.26■□□□□ 0.67
VARS-216ENST00000428445 COL4A4P53420 1690 aaPredicted RBP19.25■□□□□ 0.67
VARS-216ENST00000428445 HAS3O00219 553 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 LAMC2Q13753 1193 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 MYSM1Q5VVJ2 828 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 CNKSR3Q6P9H4 555 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.25■□□□□ 0.677e-7■■□□□ 11.5
VARS-216ENST00000428445 PPTC7Q8NI37 304 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 EMID1Q96A84 441 aaPredicted RBP19.25■□□□□ 0.67
VARS-216ENST00000428445 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 CTNNA3Q9UI47 895 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 PCDHA1Q9Y5I3 950 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 TAF6LQ9Y6J9 622 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 BDP1A6H8Y1 2624 aa19.25■□□□□ 0.67
VARS-216ENST00000428445 PALM3A6NDB9 673 aaPredicted RBP19.24■□□□□ 0.67
VARS-216ENST00000428445 GGPS1O95749 300 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 F2P00734 622 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 CXCL10P02778 98 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 PGM5Q15124 567 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 PIGSQ96S52 555 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 OSBPL7Q9BZF2 842 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
VARS-216ENST00000428445 HIP1O00291 1037 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 ZBTB5O15062 677 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 PDE4AP27815 886 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 PTH1RQ03431 593 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 RBL2Q08999 1139 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 PTK7Q13308 1070 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 CELF3Q5SZQ8 465 aaKnown RBP19.23■□□□□ 0.67
VARS-216ENST00000428445 STOX1Q6ZVD7 989 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 VSIG10LQ86VR7 867 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 CNNM2Q9H8M5 875 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 SUGCTQ9HAC7 445 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 TELO2Q9Y4R8 837 aa19.23■□□□□ 0.67
VARS-216ENST00000428445 CYTH3O43739 400 aa19.22■□□□□ 0.67
VARS-216ENST00000428445 GSPT1P15170 499 aaKnown RBP19.22■□□□□ 0.67
VARS-216ENST00000428445 C16orf70Q9BSU1 422 aa19.22■□□□□ 0.67
VARS-216ENST00000428445 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
VARS-216ENST00000428445 EPHX3Q9H6B9 360 aa19.22■□□□□ 0.67
VARS-216ENST00000428445 GJB5O95377 273 aa19.21■□□□□ 0.67
VARS-216ENST00000428445 UBA1P22314 1058 aaKnown RBP19.21■□□□□ 0.67
VARS-216ENST00000428445 GHRHRQ02643 423 aa19.21■□□□□ 0.67
VARS-216ENST00000428445 AAK1Q2M2I8 961 aa19.21■□□□□ 0.67
VARS-216ENST00000428445 HLA-CQ95604 372 aa19.21■□□□□ 0.67
VARS-216ENST00000428445 RAD9AQ99638 391 aa19.21■□□□□ 0.67
VARS-216ENST00000428445 ABHD14A-ACY1A0A1B0GW23 586 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 LINC01553A4QN01 128 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 PPFIA4O75335 1185 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 CYP21A2P08686 494 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 HOXD8P13378 290 aaPredicted RBP19.2■□□□□ 0.66
VARS-216ENST00000428445 THPOP40225 353 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 IKBKEQ14164 716 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 GRM4Q14833 912 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 DBF4BQ8NFT6 615 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 KHSRPQ92945 711 aaKnown RBP eCLIP19.2■□□□□ 0.66
VARS-216ENST00000428445 RIOX1Q9H6W3 641 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 MLXIPQ9HAP2 919 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 RTEL1Q9NZ71 1219 aa19.2■□□□□ 0.66
VARS-216ENST00000428445 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 GCOM1H8Y6P7 765 aaPredicted RBP19.19■□□□□ 0.66
VARS-216ENST00000428445 IFIT3O14879 490 aaKnown RBP19.19■□□□□ 0.66
VARS-216ENST00000428445 TREHO43280 583 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 LGR5O75473 907 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 POLR2MP0CAP2 368 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 CCND2P30279 289 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 C17orf80Q9BSJ5 609 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 COG5Q9UP83 839 aa19.19■□□□□ 0.66
VARS-216ENST00000428445 RSPH10B2B2RC85 870 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 RSPH10BP0C881 870 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 ERVK-21P61565 698 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 MRPS9P82933 396 aaKnown RBP19.18■□□□□ 0.66
VARS-216ENST00000428445 MYOCDQ8IZQ8 938 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 ATP6V0A1Q93050 837 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
VARS-216ENST00000428445 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 MICAL3Q7RTP6 2002 aa19.18■□□□□ 0.66
VARS-216ENST00000428445 SIP14410 1827 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 C17orf102A2RUQ5 167 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 H3BRB1 525 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 PARNO95453 639 aaKnown RBP19.17■□□□□ 0.66
VARS-216ENST00000428445 LGALS2P05162 132 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 CTSHP09668 335 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 TRDNQ13061 729 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 SEMA3FQ13275 785 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms