RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
ITSN1-216ENST00000428240 ANAPC4Q9UJX5 808 aa9.6□□□□□ -0.87
ITSN1-216ENST00000428240 EMSYQ7Z589 1322 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 MBTPS2O43462 519 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 ORC4O43929 436 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 SORBS3O60504 671 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 FGRP09769 529 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 GOLGA8HP0CJ92 632 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 SNHG28P0DPA3 235 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 GTF2F1P35269 517 aaKnown RBP eCLIP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 THPOP40225 353 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 HYAL1Q12794 435 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 TCF15Q12870 199 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 STXBP2Q15833 593 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 DHX37Q8IY37 1157 aaKnown RBP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 PPTC7Q8NI37 304 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 PI4K2BQ8TCG2 481 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 SYTL5Q8TDW5 730 aaPredicted RBP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 EDAQ92838 391 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
ITSN1-216ENST00000428240 FSD1Q9BTV5 496 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 TOMM22Q9NS69 142 aa9.59□□□□□ -0.87
ITSN1-216ENST00000428240 CFAP54Q96N23 3096 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 GRM6O15303 877 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 LINC01565O15544 149 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 ST18O60284 1047 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 TBX10O75333 385 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 CSPG5O95196 566 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 LINC00271P0C7V0 271 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
ITSN1-216ENST00000428240 LAMC2Q13753 1193 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 HSDL1Q3SXM5 330 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 SERINC5Q86VE9 423 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 OTUD7AQ8TE49 926 aaPredicted RBP9.58□□□□□ -0.88
ITSN1-216ENST00000428240 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
ITSN1-216ENST00000428240 RMDN3Q96TC7 470 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 POP1Q99575 1024 aaKnown RBP9.58□□□□□ -0.88
ITSN1-216ENST00000428240 UBA5Q9GZZ9 404 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 TCP11L1Q9NUJ3 509 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 PNMA2Q9UL42 364 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 MRVI1Q9Y6F6 885 aa9.58□□□□□ -0.88
ITSN1-216ENST00000428240 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 DMDP11532 3685 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 STXBP3O00186 592 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 TREHO43280 583 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 RGS20O76081 388 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 CTSHP09668 335 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 HOXD8P13378 290 aaPredicted RBP9.57□□□□□ -0.88
ITSN1-216ENST00000428240 PTPN5P54829 565 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 CDC37Q16543 378 aaPredicted RBP9.57□□□□□ -0.88
ITSN1-216ENST00000428240 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 ARHGEF16Q5VV41 709 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 BMP8AQ7Z5Y6 402 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 C16orf70Q9BSU1 422 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 IFIH1Q9BYX4 1025 aaKnown RBP9.57□□□□□ -0.88
ITSN1-216ENST00000428240 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 DCTPP1Q9H773 170 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 ALG13Q9NP73 1137 aaKnown RBP9.57□□□□□ -0.88
ITSN1-216ENST00000428240 FAM86C1Q9NVL1 165 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 COL4A6Q14031 1691 aa9.57□□□□□ -0.88
ITSN1-216ENST00000428240 TTC41PQ6P2S7 1318 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 C17orf102A2RUQ5 167 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 TMEM221A6NGB7 291 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 C5orf67F2Z3F1 127 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 M0R296 226 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 NCK2O43639 380 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 PPFIA4O75335 1185 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
ITSN1-216ENST00000428240 FGAP02671 866 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 NR3C2P08235 984 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 HOXC8P31273 242 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 CTNNB1P35222 781 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 SP2Q02086 613 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 SMAD4Q13485 552 aaKnown RBP9.56□□□□□ -0.88
ITSN1-216ENST00000428240 TRIM67Q6ZTA4 783 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 FIBCD1Q8N539 461 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 SEPT8Q92599 483 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 ATP6V0A1Q93050 837 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 IL17RAQ96F46 866 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 SPATA33Q96N06 139 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 CHMP4BQ9H444 224 aaKnown RBP9.56□□□□□ -0.88
ITSN1-216ENST00000428240 RNPEPQ9H4A4 650 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 PXMP2Q9NR77 195 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 ABCB11O95342 1321 aa9.56□□□□□ -0.88
ITSN1-216ENST00000428240 MICAL3Q7RTP6 2002 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 OPLAHO14841 1288 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 GFRA3O60609 400 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 GGPS1O95749 300 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 BMPR1AP36894 532 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 ADAM15Q13444 863 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 CAMK1Q14012 370 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 ALX1Q15699 326 aa9.55□□□□□ -0.88
ITSN1-216ENST00000428240 CELF3Q5SZQ8 465 aaKnown RBP9.55□□□□□ -0.88
ITSN1-216ENST00000428240 GPATCH4Q5T3I0 446 aaKnown RBP9.55□□□□□ -0.88
ITSN1-216ENST00000428240 ADGRF4Q8IZF3 695 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms