RNA–Protein interactions for RNA: ENST00000428083.1

RHOA-IT1-201, RHOA intronic transcript 1, humanhuman

TSL 3 BASIC

Gene RHOA-IT1, Length 517 nt, Biotype sense intronic, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-IT1-201ENST00000428083 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 HAS3O00219 553 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PQBP1O60828 265 aaKnown RBP12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 F2P00734 622 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 CPA1P15085 419 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 RAG1P15918 1043 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SYN1P17600 705 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 ADCY7P51828 1080 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 NAPAP54920 295 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PKN1Q16512 942 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 GALNT17Q6IS24 598 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 NIPA1Q7RTP0 329 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 IL31RAQ8NI17 732 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PDRG1Q9NUG6 133 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 UBIAD1Q9Y5Z9 338 aa12.17□□□□□ -0.46
RHOA-IT1-201ENST00000428083 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 CDKL5O76039 1030 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SLC34A2O95436 690 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PARNO95453 639 aaKnown RBP12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 CYP3A4P08684 503 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SP2Q02086 613 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 CCDC148Q8NFR7 591 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PIBF1Q8WXW3 757 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
RHOA-IT1-201ENST00000428083 DEXIO95424 95 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 GGPS1O95749 300 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PFKMP08237 780 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 MYL3P08590 195 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 ITGB5P18084 799 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SREBF1P36956 1147 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 FPGSQ05932 587 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 RBL2Q08999 1139 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 RAB11FIP4Q86YS3 637 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 KAT2BQ92831 832 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 COPS5Q92905 334 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 BADQ92934 168 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 PRDM5Q9NQX1 630 aaPredicted RBP12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
RHOA-IT1-201ENST00000428083 MEIS1O00470 390 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CPLX1O14810 134 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 B4GALT4O60513 344 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 PFKFB2O60825 505 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 HOXC8P31273 242 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 RFC2P35250 354 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 MTMR1Q13613 665 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 HSDL1Q3SXM5 330 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 FAM43BQ6ZT52 329 aaPredicted RBP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 C16orf70Q9BSU1 422 aa12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 UPF3BQ9BZI7 483 aaKnown RBP12.14□□□□□ -0.47
RHOA-IT1-201ENST00000428083 NFASCO94856 1347 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 KCNA2P16389 499 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 ITGB8P26012 769 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CIITAP33076 1130 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 USP11P51784 963 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 PSMC6P62333 389 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 BFSP2Q13515 415 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 REXO1Q8N1G1 1221 aaKnown RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 GPR20Q99678 358 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
RHOA-IT1-201ENST00000428083 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
RHOA-IT1-201ENST00000428083 H3BRB1 525 aa12.12□□□□□ -0.47
RHOA-IT1-201ENST00000428083 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
RHOA-IT1-201ENST00000428083 CAND2O75155 1236 aa12.12□□□□□ -0.47
RHOA-IT1-201ENST00000428083 RPLP2P05387 115 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms