RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	TBC1D22B	Q9NU19	505 aa		13.65	□□□□□ -0.22
HDLBP-215	ENST00000427487	TFIP11	Q9UBB9	837 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-215	ENST00000427487	CNPY2	Q9Y2B0	182 aa		13.65	□□□□□ -0.22
HDLBP-215	ENST00000427487	NFASC	O94856	1347 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	KIAA1217	Q5T5P2	1943 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487		A0A1W2PQ27	194 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487		A0A1W2PQ64	194 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487		A0A1W2PQD8	194 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	SLC37A4	O43826	429 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	CUTA	O60888	179 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	MYCL	P12524	364 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	NCL	P19338	710 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	ATP2B1	P20020	1258 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	LONP1	P36776	959 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	ADAL	Q6DHV7	355 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	DTHD1	Q6ZMT9	781 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	KCTD17	Q8N5Z5	321 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	NPLOC4	Q8TAT6	608 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	PXYLP1	Q8TE99	480 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	HAS1	Q92839	578 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	SLC5A5	Q92911	643 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	PURB	Q96QR8	312 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	KCNH7	Q9NS40	1196 aa		13.64	□□□□□ -0.23
HDLBP-215	ENST00000427487	DDX11L8	A8MPP1	907 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	IPO5	O00410	1097 aa	Known RBP	13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	MSH4	O15457	936 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	RGS20	O76081	388 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	FLT3LG	P49771	235 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	NBR1	Q14596	966 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	TMEM266	Q2M3C6	531 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	POTED	Q86YR6	584 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	IGSF22	Q8N9C0	903 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	RDM1	Q8NG50	284 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	SCFD2	Q8WU76	684 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	WDR11	Q9BZH6	1224 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	KATNBL1	Q9H079	304 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	TMEM60	Q9H2L4	133 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	AGO4	Q9HCK5	861 aa	Known RBP	13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	FBXO2	Q9UK22	296 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	PCDHA12	Q9UN75	941 aa		13.63	□□□□□ -0.23
HDLBP-215	ENST00000427487	FAM237A	A0A1B0GTK4	181 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	NKRF	O15226	690 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	PSMD10	O75832	226 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	SNAI1	O95863	264 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	UBE2H	P62256	183 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	UBXN2A	P68543	259 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	PPP2R5C	Q13362	524 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	NEDD9	Q14511	834 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	TTLL4	Q14679	1199 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	B3GNT9	Q6UX72	402 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	CYP2W1	Q8TAV3	490 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	CD99L2	Q8TCZ2	262 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	ZNF577	Q9BSK1	485 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	ARHGAP39	Q9C0H5	1083 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	PCDHA7	Q9UN72	937 aa		13.62	□□□□□ -0.23
HDLBP-215	ENST00000427487	KCNA2	P16389	499 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	CYP2B6	P20813	491 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	MUT	P22033	750 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	CMA1	P23946	247 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	MCM4	P33991	863 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	ME1	P48163	572 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	CEBPZ	Q03701	1054 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	PRKCZ	Q05513	592 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	SEMA3F	Q13275	785 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	MFSD14C	Q5VZR4	134 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	IQSEC1	Q6DN90	963 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	CCDC62	Q6P9F0	684 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	EMID1	Q96A84	441 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	PYM1	Q9BRP8	204 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	TTC12	Q9H892	705 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487		Q9Y3F1	56 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	MCM3AP	O60318	1980 aa		13.61	□□□□□ -0.23
HDLBP-215	ENST00000427487	DHX15	O43143	795 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	MARCH6	O60337	910 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	AR	P10275	920 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	SFN	P31947	248 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	KRT76	Q01546	638 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	SPIRE1	Q08AE8	756 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	ACVR2B	Q13705	512 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	LRCH2	Q5VUJ6	765 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	TAPT1	Q6NXT6	567 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	OTOP1	Q7RTM1	612 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	SLAIN1	Q8ND83	568 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	NEK9	Q8TD19	979 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	SDF4	Q9BRK5	362 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	TEKT3	Q9BXF9	490 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	CCSER1	Q9C0I3	900 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	LMBRD1	Q9NUN5	540 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	DDX41	Q9UJV9	622 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	VAV3	Q9UKW4	847 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	GABRQ	Q9UN88	632 aa		13.6	□□□□□ -0.23
HDLBP-215	ENST00000427487	MRVI1	Q9Y6F6	885 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms