RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 CALM1P0DP23 149 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CALM2P0DP24 149 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CALM3P0DP25 149 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 MYCLP12524 364 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CCL23P55773 120 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PTPN11Q06124 597 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PPIGQ13427 754 aaKnown RBP eCLIP18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 FBXL16Q8N461 479 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 HERVK_113Q902F9 699 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 SCLYQ96I15 445 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 STXBP5LQ9Y2K9 1186 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 ATG2AQ2TAZ0 1938 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 SPATA31C2B4DYI2 1134 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CCND2P30279 289 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 UBE2SQ16763 222 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PCNX4Q63HM2 1172 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 NFXL1Q6ZNB6 911 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
HLA-DQB2-230ENST00000427449 KAT6AQ92794 2004 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 GRXCR1A8MXD5 290 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PITPNM1O00562 1244 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 GGPS1O95749 300 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PBX2P40425 430 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 GNAQP50148 359 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 RCAN1P53805 252 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TRAF1Q13077 416 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TCTN1Q2MV58 587 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 RNF20Q5VTR2 975 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TMEM199Q8N511 208 aa18.42■□□□□ 0.54
HLA-DQB2-230ENST00000427449 STXBP3O00186 592 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 SORBS3O60504 671 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TGFB3P10600 412 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 ITGB5P18084 799 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CLK2P49760 499 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 LAMC2Q13753 1193 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CCDC82Q8N4S0 544 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 SEMA6BQ9H3T3 888 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
HLA-DQB2-230ENST00000427449 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 DNAJB2P25686 324 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PSEN2P49810 448 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 EVCP57679 992 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 NTRK3Q16288 839 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 DGKDQ16760 1214 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CRYGNQ8WXF5 182 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 FAM161BQ96MY7 647 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 PBX4Q9BYU1 374 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 UBIAD1Q9Y5Z9 338 aa18.4■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TMEM265A0A087WTH1 108 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ZBTB43O43298 467 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ATP9AO75110 1047 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 STAM2O75886 525 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 KCNA2P16389 499 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ZNF200P98182 395 aaPredicted RBP18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 KRT32Q14532 448 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 MFSD10Q14728 455 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 PKN1Q16512 942 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 RTN1Q16799 776 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 GPR20Q99678 358 aa18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 SEC63Q9UGP8 760 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB2-230ENST00000427449 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 FIBPO43427 364 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 LGALS2P05162 132 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ADAM17P78536 824 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 BRDTQ58F21 947 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 FAM47CQ5HY64 1035 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 SPATA33Q96N06 139 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 JAKMIP1Q96N16 626 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 RTEL1Q9NZ71 1219 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 YBX2Q9Y2T7 364 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 XIRP2A4UGR9 3374 aa18.38■□□□□ 0.53
HLA-DQB2-230ENST00000427449 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 PPFIA4O75335 1185 aa18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB2-230ENST00000427449 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms