RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 HIPK3Q9H422 1215 aa20.08■□□□□ 0.81
SLC6A1-202ENST00000425938 EHMT1Q9H9B1 1298 aa20.08■□□□□ 0.81
SLC6A1-202ENST00000425938 ZSWIM6Q9HCJ5 1215 aa20.08■□□□□ 0.81
SLC6A1-202ENST00000425938 MTMR10Q9NXD2 777 aa20.08■□□□□ 0.81
SLC6A1-202ENST00000425938 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 UBA1P22314 1058 aaKnown RBP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 ADD1P35611 737 aaKnown RBP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 PTPN11Q06124 597 aaPredicted RBP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 UBE2SQ16763 222 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 NLRX1Q86UT6 975 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 SPATA33Q96N06 139 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 RTEL1Q9NZ71 1219 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 NID2Q14112 1375 aa20.07■□□□□ 0.8
SLC6A1-202ENST00000425938 FIBPO43427 364 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 ICAM3P32942 547 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 ADCY7P51828 1080 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 SMAD3P84022 425 aaKnown RBP20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 AKAP17AQ02040 695 aaKnown RBP20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 NEDD9Q14511 834 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 DOCK5Q9H7D0 1870 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 BARHL2Q9NY43 387 aa20.06■□□□□ 0.8
SLC6A1-202ENST00000425938 SPATA31C2B4DYI2 1134 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 STXBP3O00186 592 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 SORBS3O60504 671 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 PPFIA4O75335 1185 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 CYP2C18P33260 490 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 SP2Q02086 613 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 PFKFB3Q16875 520 aaPredicted RBP20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 NOC4LQ9BVI4 516 aaKnown RBP20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 RIC8AQ9NPQ8 531 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 PCDHA6Q9UN73 950 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 NOD1Q9Y239 953 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 PCDHA8Q9Y5H6 950 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 COL6A3P12111 3177 aa20.05■□□□□ 0.8
SLC6A1-202ENST00000425938 SMCO2A6NFE2 343 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 NOP56O00567 594 aaKnown RBP20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 FOSP01100 380 aaPredicted RBP20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 SCG2P13521 617 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 EVCP57679 992 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 HSDL1Q3SXM5 330 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 ZNF697Q5TEC3 545 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 TYW1BQ6NUM6 668 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 CDHR1Q96JP9 859 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 UPF3BQ9BZI7 483 aaKnown RBP20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 STXBP5LQ9Y2K9 1186 aa20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 TRIP12Q14669 1992 aaPredicted RBP20.04■□□□□ 0.8
SLC6A1-202ENST00000425938 F2P00734 622 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 ZNF286BP0CG31 522 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 CYP2C9P11712 490 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 HOXD8P13378 290 aaPredicted RBP20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 CSF2RAP15509 400 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 PDIA3P30101 505 aaKnown RBP20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 METTL7BQ6UX53 244 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 GIMAP8Q8ND71 665 aaPredicted RBP20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 CCDC12Q8WUD4 166 aaPredicted RBP20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 KAT2BQ92831 832 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 GPRASP2Q96D09 838 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 SENP7Q9BQF6 1050 aa20.03■□□□□ 0.8
SLC6A1-202ENST00000425938 PRPF3O43395 683 aaKnown RBP20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 PSEN2P49810 448 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 SEMA3FQ13275 785 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 MFSD10Q14728 455 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 PSRC1Q6PGN9 363 aaPredicted RBP20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 C16orf59Q7L2K0 433 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 SESTD1Q86VW0 696 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 C7orf31Q8N865 590 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 PPP1R13LQ8WUF5 828 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 ALG1Q9BT22 464 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 PDRG1Q9NUG6 133 aa20.02■□□□□ 0.8
SLC6A1-202ENST00000425938 KAT6AQ92794 2004 aa20.02■□□□□ 0.79
SLC6A1-202ENST00000425938 CCL23P55773 120 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 ANAPC15P60006 121 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 AP3B2Q13367 1082 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 PTGISQ16647 500 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 KIAA0753Q2KHM9 967 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 TMEM240Q5SV17 173 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 CYFIP1Q7L576 1253 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 PHKBQ93100 1093 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 SLC26A6Q9BXS9 759 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 RNF26Q9BY78 433 aaPredicted RBP20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 IL23AQ9NPF7 189 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 UMODL1Q5DID0 1318 aa20.01■□□□□ 0.79
SLC6A1-202ENST00000425938 HSFX4A0A1B0GTS1 333 aaPredicted RBP20■□□□□ 0.79
SLC6A1-202ENST00000425938 HSFX3A0A1B0GWH4 333 aaPredicted RBP20■□□□□ 0.79
SLC6A1-202ENST00000425938 IFNAR1P17181 557 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 ITGB5P18084 799 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 BFSP2Q13515 415 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 MTMR1Q13613 665 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 CCDC155Q8N6L0 562 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms