RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 HIP1O00291 1037 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 ZBTB5O15062 677 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 GJB5O95377 273 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
ATG4B-209ENST00000425239 HOXC8P31273 242 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 PTK7Q13308 1070 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 MFSD10Q14728 455 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 KIAA0753Q2KHM9 967 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
ATG4B-209ENST00000425239 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 CNKSR3Q6P9H4 555 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 CCDC155Q8N6L0 562 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 C16orf70Q9BSU1 422 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 RIOX1Q9H6W3 641 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
ATG4B-209ENST00000425239 CYTH3O43739 400 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 ZNF286BP0CG31 522 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 PGM5Q15124 567 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 IFIT1BQ5T764 474 aaKnown RBP17.44■□□□□ 0.38
ATG4B-209ENST00000425239 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
ATG4B-209ENST00000425239 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
ATG4B-209ENST00000425239 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 COG5Q9UP83 839 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 MRVI1Q9Y6F6 885 aa17.44■□□□□ 0.38
ATG4B-209ENST00000425239 BAZ2BQ9UIF8 2168 aaKnown RBP17.43■□□□□ 0.38
ATG4B-209ENST00000425239 COL4A4P53420 1690 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-209ENST00000425239 ABHD14A-ACY1A0A1B0GW23 586 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-209ENST00000425239 PDE4AP27815 886 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-209ENST00000425239 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 RAD9AQ99638 391 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 OSBPL7Q9BZF2 842 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 SUGCTQ9HAC7 445 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 LMCD1Q9NZU5 365 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 TAF6LQ9Y6J9 622 aa17.43■□□□□ 0.38
ATG4B-209ENST00000425239 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
ATG4B-209ENST00000425239 TGFB3P10600 412 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
ATG4B-209ENST00000425239 KCNJ6P48051 423 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 ERVK-21P61565 698 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 TROAPQ12815 778 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 AAK1Q2M2I8 961 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 SERINC5Q86VE9 423 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 ZFP91Q96JP5 570 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-209ENST00000425239 PIGSQ96S52 555 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 KATNAL1Q9BW62 490 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 BRWD1Q9NSI6 2320 aa17.42■□□□□ 0.38
ATG4B-209ENST00000425239 LINC01553A4QN01 128 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 CYP21A2P08686 494 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-209ENST00000425239 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
ATG4B-209ENST00000425239 MRPS9P82933 396 aaKnown RBP17.41■□□□□ 0.38
ATG4B-209ENST00000425239 GRM4Q14833 912 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 KCNV1Q6PIU1 500 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATG4B-209ENST00000425239 HLA-CQ95604 372 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 SPATA33Q96N06 139 aa17.41■□□□□ 0.38
ATG4B-209ENST00000425239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-209ENST00000425239 SORBS3O60504 671 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 GGPS1O95749 300 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 HTRA4P83105 476 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-209ENST00000425239 PTH1RQ03431 593 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 IKBKEQ14164 716 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
ATG4B-209ENST00000425239 TELO2Q9Y4R8 837 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
ATG4B-209ENST00000425239 LGR5O75473 907 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 ICAM3P32942 547 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 PLEKHG4Q58EX7 1191 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 DBF4BQ8NFT6 615 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-209ENST00000425239 GDPD5Q8WTR4 605 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 KHSRPQ92945 711 aaKnown RBP eCLIP17.39■□□□□ 0.373e-7■■□□□ 12.3
ATG4B-209ENST00000425239 ZBED2Q9BTP6 218 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 RNPEPQ9H4A4 650 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 EPHX3Q9H6B9 360 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 SIP14410 1827 aa17.39■□□□□ 0.37
ATG4B-209ENST00000425239 MICAL3Q7RTP6 2002 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 H3BRB1 525 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-209ENST00000425239 EFCAB14O75071 495 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 ADAM17P78536 824 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 INPP4AQ96PE3 977 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-209ENST00000425239 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
ATG4B-209ENST00000425239 TUT1Q9H6E5 874 aaKnown RBP17.38■□□□□ 0.37
ATG4B-209ENST00000425239 CD320Q9NPF0 282 aa17.38■□□□□ 0.37
ATG4B-209ENST00000425239 RSPH10B2B2RC85 870 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms