RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
NCDN-204ENST00000423723 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
NCDN-204ENST00000423723 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
NCDN-204ENST00000423723 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
NCDN-204ENST00000423723 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 HAS3O00219 553 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 CPA1P15085 419 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 RAG1P15918 1043 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 CCND2P30279 289 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
NCDN-204ENST00000423723 SP2Q02086 613 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 SEMA3FQ13275 785 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 NTRK3Q16288 839 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 RTN1Q16799 776 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 CELF3Q5SZQ8 465 aaKnown RBP13.3□□□□□ -0.28
NCDN-204ENST00000423723 PCNX4Q63HM2 1172 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 Q6ZUG5 572 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 PPTC7Q8NI37 304 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 AFG1LQ8WV93 481 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 KAT2BQ92831 832 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 JAKMIP1Q96N16 626 aaKnown RBP13.3□□□□□ -0.28
NCDN-204ENST00000423723 SENP7Q9BQF6 1050 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
NCDN-204ENST00000423723 ALDH8A1Q9H2A2 487 aaPredicted RBP13.3□□□□□ -0.28
NCDN-204ENST00000423723 TCHHQ07283 1943 aa13.3□□□□□ -0.28
NCDN-204ENST00000423723 TLR3O15455 904 aaKnown RBP13.29□□□□□ -0.28
NCDN-204ENST00000423723 B4GALT4O60513 344 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 MMP3P08254 477 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
NCDN-204ENST00000423723 EPHB4P54760 987 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 PSMC6P62333 389 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 PKP1Q13835 747 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 BRF1Q92994 677 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
NCDN-204ENST00000423723 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
NCDN-204ENST00000423723 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
NCDN-204ENST00000423723 MAFGO15525 162 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 MYCLP12524 364 aaPredicted RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 TOB2Q14106 344 aaPredicted RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 SHHQ15465 462 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 PKN1Q16512 942 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 DGKDQ16760 1214 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 WWC2Q6AWC2 1192 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 CUL5Q93034 780 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 NOC4LQ9BVI4 516 aaKnown RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 PRDM5Q9NQX1 630 aaPredicted RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 SH2B1Q9NRF2 756 aaPredicted RBP13.28□□□□□ -0.28
NCDN-204ENST00000423723 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
NCDN-204ENST00000423723 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 STXBP3O00186 592 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 PRPF3O43395 683 aaKnown RBP13.27□□□□□ -0.29
NCDN-204ENST00000423723 FIBPO43427 364 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 F2P00734 622 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
NCDN-204ENST00000423723 MYL3P08590 195 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
NCDN-204ENST00000423723 IFNAR1P17181 557 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 UBA1P22314 1058 aaKnown RBP13.27□□□□□ -0.29
NCDN-204ENST00000423723 HOXC8P31273 242 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 AK2P54819 239 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 FPGSQ05932 587 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 RBL2Q08999 1139 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 PFKFB3Q16875 520 aaPredicted RBP13.27□□□□□ -0.29
NCDN-204ENST00000423723 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
NCDN-204ENST00000423723 SMARCC2Q8TAQ2 1214 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 CRYGNQ8WXF5 182 aa13.27□□□□□ -0.29
NCDN-204ENST00000423723 GPKOWQ92917 476 aaPredicted RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms