RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PCDHB3Q9Y5E6 796 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SCN11AQ9UI33 1791 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PHLPP1O60346 1717 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 AP5Z1O43299 807 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 NTRK1P04629 796 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 TPM3P06753 285 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ITGA6P23229 1130 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PSMA5P28066 241 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ADSLP30566 484 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 IRX4P78413 519 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MYL7Q01449 175 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 GFPT1Q06210 699 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 FOXC1Q12948 553 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 DGKDQ16760 1214 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PTCRAQ6ISU1 281 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 EEPD1Q7L9B9 569 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 HOMER1Q86YM7 354 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SUN3Q8TAQ9 357 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 DDX12PQ92771 950 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF512Q96ME7 567 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 NDRG2Q9UN36 371 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 IL16Q14005 1332 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 KIF24Q5T7B8 1368 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SPTLC1O15269 473 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 POLR2BP30876 1174 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 DUSP3P51452 185 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 HAUS3Q68CZ6 603 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CENPQQ7L2Z9 268 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 BBS5Q8N3I7 341 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GMCL1Q96IK5 515 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF558Q96NG5 402 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 LRRC27Q9C0I9 530 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 WBP1LQ9NX94 342 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 PKD2L1Q9P0L9 805 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RABGAP1Q9Y3P9 1069 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SLC4A4Q9Y6R1 1079 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 UTP20O75691 2785 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 NFAT5O94916 1531 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SLC15A5A6NIM6 579 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RASSF10A6NK89 507 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GCOM1H8Y6P7 765 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GPR182O15218 404 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 USP2O75604 605 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 IPO7O95373 1038 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SGPL1O95470 568 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 POLR2MP0CAP2 368 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SMARCA1P28370 1054 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 STAT3P40763 770 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 HNRNPH2P55795 449 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 PPP2R2AP63151 447 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 TRPC3Q13507 836 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CUL4BQ13620 913 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 NEDD9Q14511 834 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 PAN2Q504Q3 1202 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GJC2Q5T442 439 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CATSPER4Q7RTX7 472 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 KAZALD1Q96I82 304 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 FAM167AQ96KS9 214 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SH3BP1Q9Y3L3 701 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 MST1RQ04912 1400 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 H0YCG3 227 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GAS8O95995 478 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 IL15P40933 162 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RPIAP49247 311 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 COG2Q14746 738 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 KARSQ15046 597 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RNF43Q68DV7 783 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SND1Q7KZF4 910 aaKnown RBP eCLIP3.95□□□□□ -1.781e-6■□□□□ 8.7
TOP2A-201ENST00000423485 TRMT11Q7Z4G4 463 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 FCHSD1Q86WN1 690 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC89Q8N998 374 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 PIGBQ92521 554 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 ACDQ96AP0 544 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SLF1Q9BQI6 1058 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GCOM2Q9BZD3 368 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 UBA5Q9GZZ9 404 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 OSBPL5Q9H0X9 879 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF576Q9H609 170 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 ACAD9Q9H845 621 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 DDX20Q9UHI6 824 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 ABCC11Q96J66 1382 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 NUP188Q5SRE5 1749 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 MYH10P35580 1976 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 IFIT3O14879 490 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 KDM1AO60341 852 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CTNND1O60716 968 aaKnown RBP3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RPS6KA5O75582 802 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SMC2O95347 1197 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 FGF19O95750 216 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC175P0C221 793 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 BTDP43251 543 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 HMGCS2P54868 508 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 RAD51Q06609 339 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 STIM1Q13586 685 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 SNX17Q15036 470 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC181Q5TID7 509 aa3.95□□□□□ -1.78
TOP2A-201ENST00000423485 MFSD6Q6ZSS7 791 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms