RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 MLXIPQ9HAP2 919 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 MROH7Q68CQ1 1323 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 K7ELQ4 463 aaPredicted RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 TLR3O15455 904 aaKnown RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 FIBPO43427 364 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 PFKFB2O60825 505 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 STAM2O75886 525 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 RGS20O76081 388 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 LARGE1O95461 756 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 FOSP01100 380 aaPredicted RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 UBA1P22314 1058 aaKnown RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 GNA11P29992 359 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 ITGA7Q13683 1181 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 PKN1Q16512 942 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 CCDC62Q6P9F0 684 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 BICD2Q8TD16 824 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 MTG1Q9BT17 334 aaPredicted RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 TMEM39AQ9NV64 488 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
HERC3-204ENST00000422770 ELP1O95163 1332 aa11.05□□□□□ -0.64
HERC3-204ENST00000422770 KAT6AQ92794 2004 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 ARVCFO00192 962 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 MMP3P08254 477 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 CLTBP09497 229 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 XBP1P17861 261 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
HERC3-204ENST00000422770 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 MTMR1Q13613 665 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 LAMC2Q13753 1193 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 DGKDQ16760 1214 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 ME3Q16798 604 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 XRRA1Q6P2D8 792 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 CYFIP1Q7L576 1253 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 SNX21Q969T3 373 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 AIFM3Q96NN9 605 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
HERC3-204ENST00000422770 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
HERC3-204ENST00000422770 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 ESYT2A0FGR8 921 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 A6NJR5 290 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 KPNA6O60684 536 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 HSP90AA1P07900 732 aaKnown RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 RAG1P15918 1043 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 MCM2P49736 904 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 SP2Q02086 613 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 NEDD9Q14511 834 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 SNX17Q15036 470 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 WASF1Q92558 559 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 GTF3C6Q969F1 213 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 CDHR1Q96JP9 859 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 UBE2OQ9C0C9 1292 aaKnown RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 SH3GLB2Q9NR46 395 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 LIMCH1Q9UPQ0 1083 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
HERC3-204ENST00000422770 NOD1Q9Y239 953 aa11.03□□□□□ -0.64
HERC3-204ENST00000422770 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.65
HERC3-204ENST00000422770 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 TGFB3P10600 412 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 NKX3-2P78367 333 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 ARHGAP4P98171 946 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 TRIM29Q14134 588 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 HABP4Q5JVS0 413 aaKnown RBP11.02□□□□□ -0.65
HERC3-204ENST00000422770 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 MCTP2Q6DN12 878 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 PPTC7Q8NI37 304 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 SDF4Q9BRK5 362 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 BCAS3Q9H6U6 928 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 PCDHA4Q9UN74 947 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 TRIP12Q14669 1992 aaPredicted RBP11.02□□□□□ -0.65
HERC3-204ENST00000422770 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
HERC3-204ENST00000422770 ITGB5P18084 799 aa11.01□□□□□ -0.65
HERC3-204ENST00000422770 ICAM3P32942 547 aa11.01□□□□□ -0.65
HERC3-204ENST00000422770 SREBF1P36956 1147 aa11.01□□□□□ -0.65
HERC3-204ENST00000422770 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms