RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
SSB-205ENST00000422006 ITGA7Q13683 1181 aa9.53□□□□□ -0.88
SSB-205ENST00000422006 ZNF554Q86TJ5 538 aa9.53□□□□□ -0.88
SSB-205ENST00000422006 LINS1Q8NG48 757 aa9.53□□□□□ -0.88
SSB-205ENST00000422006 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
SSB-205ENST00000422006 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
SSB-205ENST00000422006 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
SSB-205ENST00000422006 TOGARAM1Q9Y4F4 1720 aa9.52□□□□□ -0.88
SSB-205ENST00000422006 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 PALLDQ8WX93 1383 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 TARSL2A2RTX5 802 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 FLOT1O75955 427 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 CD46P15529 392 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 CD97P48960 835 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 TAF11Q15544 211 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 P3H1Q32P28 736 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 NOA1Q8NC60 698 aaKnown RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 HLA-CQ95604 372 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 DHTKD1Q96HY7 919 aaPredicted RBP9.52□□□□□ -0.89
SSB-205ENST00000422006 SEZ6LQ9BYH1 1024 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 LTN1O94822 1766 aa9.52□□□□□ -0.89
SSB-205ENST00000422006 CCND1P24385 295 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 MAPK1P28482 360 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 GUCY2FP51841 1108 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 NLRP5P59047 1200 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 PPP1R7Q15435 360 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 ECM1Q16610 540 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 RNF220Q5VTB9 566 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 CLASRPQ8N2M8 674 aaKnown RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 ARHGAP18Q8N392 663 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 CYFIP2Q96F07 1278 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 CCDC68Q9H2F9 335 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 SYNCQ9H7C4 482 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 NRDE2Q9H7Z3 1164 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 VCX3AQ9NNX9 186 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 GABBR1Q9UBS5 961 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 TTLL3Q9Y4R7 772 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L21D6R901 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 BBOX1O75936 387 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.893e-6■■■■□ 19.9
SSB-205ENST00000422006 ENDOUP21128 410 aaKnown RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 ATN1P54259 1190 aaPredicted RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 TTMPQ5BVD1 217 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 CFAP157Q5JU67 520 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 KDM7AQ6ZMT4 941 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 LRRC49Q8IUZ0 686 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 LMNTD2Q8IXW0 634 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 LRRC43Q8N309 656 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 ZMAT2Q96NC0 199 aaKnown RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 NACAP1Q9BZK3 213 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 SCAND2PQ9GZW5 306 aaPredicted RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 SUCLA2Q9P2R7 463 aaPredicted RBP9.51□□□□□ -0.89
SSB-205ENST00000422006 DAAM1Q9Y4D1 1078 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 SRCAPQ6ZRS2 3230 aa9.51□□□□□ -0.89
SSB-205ENST00000422006 hCG_2014768A0A024R1R8 64 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 IKBKBO14920 756 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 ALDH1L2Q3SY69 923 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 SH2D4BQ5SQS7 431 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 FOXB2Q5VYV0 432 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 SLC2A7Q6PXP3 512 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 EHBP1Q8NDI1 1231 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 AZIN2Q96A70 460 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 MYPNQ86TC9 1320 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 EDC4Q6P2E9 1401 aaKnown RBP9.5□□□□□ -0.89
SSB-205ENST00000422006 FOXN1O15353 648 aa9.5□□□□□ -0.89
SSB-205ENST00000422006 PPIP5K2O43314 1243 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms