RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 SCG2P13521 617 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 PTPN11Q06124 597 aaPredicted RBP28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 NEDD9Q14511 834 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 MYSM1Q5VVJ2 828 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 CDHR1Q96JP9 859 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 MLXIPQ9HAP2 919 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 PCDHA6Q9UN73 950 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 PCDHA8Q9Y5H6 950 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 MYH7BA7E2Y1 1941 aa28.74■■■□□ 2.19
SNAPC3-203ENST00000421710 SMCO2A6NFE2 343 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 ITGB8P26012 769 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 FPGSQ05932 587 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 LRIT3Q3SXY7 679 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 TYW1BQ6NUM6 668 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 ZNF274Q96GC6 653 aaPredicted RBP28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 ZFP91Q96JP5 570 aaPredicted RBP28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 SPATA33Q96N06 139 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 KATNAL1Q9BW62 490 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 RNF26Q9BY78 433 aaPredicted RBP28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 RTEL1Q9NZ71 1219 aa28.73■■■□□ 2.19
SNAPC3-203ENST00000421710 SPATA31C2B4DYI2 1134 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 B4GALT4O60513 344 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 IFNAR1P17181 557 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 NBPF20Q3BBV1 942 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 FAM47CQ5HY64 1035 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 MFSD5Q6N075 450 aa28.72■■■□□ 2.19
SNAPC3-203ENST00000421710 PPFIA4O75335 1185 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 SLC34A2O95436 690 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 AP3B2Q13367 1082 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 TMEM199Q8N511 208 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 GIMAP8Q8ND71 665 aaPredicted RBP28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 GPRASP2Q96D09 838 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 TRPV6Q9H1D0 765 aa28.71■■■□□ 2.19
SNAPC3-203ENST00000421710 ESYT2A0FGR8 921 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 HOXD8P13378 290 aaPredicted RBP28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 CCT2P78371 535 aaKnown RBP28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 SP2Q02086 613 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 NTRK3Q16288 839 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 CPLX2Q6PUV4 134 aaKnown RBP28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 TRIM22Q8IYM9 498 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 SENP7Q9BQF6 1050 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 HIPK3Q9H422 1215 aa28.7■■■□□ 2.18
SNAPC3-203ENST00000421710 NOP56O00567 594 aaKnown RBP28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 CPLX1O14810 134 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 PPIGQ13427 754 aaKnown RBP eCLIP28.69■■■□□ 2.183e-7■□□□□ 11.3
SNAPC3-203ENST00000421710 MCTP2Q6DN12 878 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 METTL7BQ6UX53 244 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 PHKBQ93100 1093 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 SLC26A6Q9BXS9 759 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 PPP1R12CQ9BZL4 782 aa28.69■■■□□ 2.18
SNAPC3-203ENST00000421710 MAFGO15525 162 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 F2P00734 622 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 ANKRD1Q15327 319 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 HSDL1Q3SXM5 330 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 SESTD1Q86VW0 696 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 CCDC148Q8NFR7 591 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 ANO3Q9BYT9 981 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 NCOA5Q9HCD5 579 aaKnown RBP28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 C6orf50Q9HD87 102 aa28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 TRMT13Q9NUP7 481 aaKnown RBP28.68■■■□□ 2.18
SNAPC3-203ENST00000421710 GNA11P29992 359 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 CHMP4BP1P59074 171 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 SEMA3FQ13275 785 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 PKN1Q16512 942 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 KAT2BQ92831 832 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 IL17RAQ96F46 866 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 ZMYND12Q9H0C1 365 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 NOD1Q9Y239 953 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 UBIAD1Q9Y5Z9 338 aa28.67■■■□□ 2.18
SNAPC3-203ENST00000421710 SORBS3O60504 671 aa28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 CLK2P49760 499 aaKnown RBP28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 PSEN2P49810 448 aa28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 MTMR1Q13613 665 aa28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 CYFIP1Q7L576 1253 aa28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 BICD2Q8TD16 824 aa28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 NOC4LQ9BVI4 516 aaKnown RBP28.66■■■□□ 2.18
SNAPC3-203ENST00000421710 ZNF286BP0CG31 522 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 ITGB5P18084 799 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 SSRP1Q08945 709 aaKnown RBP28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 MFSD10Q14728 455 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 SHHQ15465 462 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 C7orf31Q8N865 590 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 JADE2Q9NQC1 790 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 LAMA3Q16787 3333 aa28.65■■■□□ 2.18
SNAPC3-203ENST00000421710 CDKL5O76039 1030 aa28.64■■■□□ 2.18
SNAPC3-203ENST00000421710 GPR153Q6NV75 609 aa28.64■■■□□ 2.18
SNAPC3-203ENST00000421710 REXO1Q8N1G1 1221 aaKnown RBP28.64■■■□□ 2.18
SNAPC3-203ENST00000421710 SH3GLB2Q9NR46 395 aa28.64■■■□□ 2.18
SNAPC3-203ENST00000421710 HAS3O00219 553 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 SOX1O00570 391 aaPredicted RBP28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 CYP2C18P33260 490 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 SREBF1P36956 1147 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 STK3Q13188 491 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 KIAA0753Q2KHM9 967 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 C9orf50Q5SZB4 431 aa28.63■■■□□ 2.17
SNAPC3-203ENST00000421710 DEXIO95424 95 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 CSF2RAP15509 400 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 PTGISQ16647 500 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 PSRC1Q6PGN9 363 aaPredicted RBP28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 CCDC155Q8N6L0 562 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms