RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZNF286BP0CG31 522 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 MYOGP15173 224 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 SELPP16109 830 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 KIAA0753Q2KHM9 967 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 LRRC8DQ7L1W4 858 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 FCHSD1Q86WN1 690 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 SPZ1Q9BXG8 430 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 KAT6AQ92794 2004 aa20.09■□□□□ 0.81
MSH6-203ENST00000420813 STAM2O75886 525 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 DDAH1O94760 285 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 GGPS1O95749 300 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 UBA1P22314 1058 aaKnown RBP20.08■□□□□ 0.81
MSH6-203ENST00000420813 SMARCA1P28370 1054 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 PTK7Q13308 1070 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 HSDL1Q3SXM5 330 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 TJAP1Q5JTD0 557 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 CTCFLQ8NI51 663 aaPredicted RBP20.08■□□□□ 0.81
MSH6-203ENST00000420813 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 ALG1Q9BT22 464 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 LY9Q9HBG7 655 aa20.08■□□□□ 0.81
MSH6-203ENST00000420813 CXCL10P02778 98 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 CA3P07451 260 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 CKBP12277 381 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 IGFBP4P22692 258 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 KIF5BP33176 963 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 GNPTABQ3T906 1256 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 HERC6Q8IVU3 1022 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 ZNF654Q8IZM8 581 aa20.07■□□□□ 0.8
MSH6-203ENST00000420813 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
MSH6-203ENST00000420813 SPTBN5Q9NRC6 3674 aaKnown RBP20.07■□□□□ 0.8
MSH6-203ENST00000420813 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 ICAM3P32942 547 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 KCNJ6P48051 423 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 SP2Q02086 613 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 GPNMBQ14956 572 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 MICAL3Q7RTP6 2002 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 TMTC2Q8N394 836 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 ATXN2LQ8WWM7 1075 aaKnown RBP20.06■□□□□ 0.8
MSH6-203ENST00000420813 PPM1EQ8WY54 764 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 TMEM87BQ96K49 555 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 INPP4AQ96PE3 977 aaPredicted RBP20.06■□□□□ 0.8
MSH6-203ENST00000420813 LZTS2Q9BRK4 669 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 MLXIPQ9HAP2 919 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 NCOR1O75376 2440 aa20.06■□□□□ 0.8
MSH6-203ENST00000420813 PRC1O43663 620 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 MCM5P33992 734 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 GNAQP50148 359 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 MRPS9P82933 396 aaKnown RBP20.05■□□□□ 0.8
MSH6-203ENST00000420813 TRIM71Q2Q1W2 868 aaKnown RBP20.05■□□□□ 0.8
MSH6-203ENST00000420813 CNKSR3Q6P9H4 555 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 RRP36Q96EU6 259 aaKnown RBP20.05■□□□□ 0.8
MSH6-203ENST00000420813 C16orf70Q9BSU1 422 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 LSG1Q9H089 658 aaKnown RBP20.05■□□□□ 0.8
MSH6-203ENST00000420813 PRDM6Q9NQX0 595 aa20.05■□□□□ 0.8
MSH6-203ENST00000420813 PIK3CDO00329 1044 aa20.04■□□□□ 0.8
MSH6-203ENST00000420813 NBNO60934 754 aa20.04■□□□□ 0.8
MSH6-203ENST00000420813 POU3F3P20264 500 aaPredicted RBP20.04■□□□□ 0.8
MSH6-203ENST00000420813 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
MSH6-203ENST00000420813 GPKOWQ92917 476 aaPredicted RBP eCLIP20.04■□□□□ 0.8
MSH6-203ENST00000420813 SEC63Q9UGP8 760 aaKnown RBP20.04■□□□□ 0.8
MSH6-203ENST00000420813 REV3LO60673 3130 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 SH2B2O14492 632 aaPredicted RBP20.03■□□□□ 0.8
MSH6-203ENST00000420813 FIBPO43427 364 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 SORBS3O60504 671 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 EFCAB14O75071 495 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 CALM1P0DP23 149 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 CALM2P0DP24 149 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 CALM3P0DP25 149 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 LIFRP42702 1097 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 NEDD9Q14511 834 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 XRRA1Q6P2D8 792 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 TRAF7Q6Q0C0 670 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 METTL7BQ6UX53 244 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 CUL5Q93034 780 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 ZFP91Q96JP5 570 aaPredicted RBP20.03■□□□□ 0.8
MSH6-203ENST00000420813 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 MYL10Q9BUA6 226 aa20.03■□□□□ 0.8
MSH6-203ENST00000420813 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 SPATA31C2B4DYI2 1134 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 H3BRB1 525 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 NOP56O00567 594 aaKnown RBP20.02■□□□□ 0.8
MSH6-203ENST00000420813 SLC27A2O14975 620 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 LGALS2P05162 132 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 HOXC8P31273 242 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 TAP1Q03518 808 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 CCDC85BQ15834 202 aaPredicted RBP20.02■□□□□ 0.8
MSH6-203ENST00000420813 PCNX4Q63HM2 1172 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 NFXL1Q6ZNB6 911 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 SERINC5Q86VE9 423 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 SMARCC2Q8TAQ2 1214 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 WNT8BQ93098 351 aa20.02■□□□□ 0.8
MSH6-203ENST00000420813 TSPYL2Q9H2G4 693 aaPredicted RBP20.02■□□□□ 0.8
MSH6-203ENST00000420813 TUT1Q9H6E5 874 aaKnown RBP20.02■□□□□ 0.8
MSH6-203ENST00000420813 COL4A4P53420 1690 aaPredicted RBP20.02■□□□□ 0.8
MSH6-203ENST00000420813 SIP14410 1827 aa20.02■□□□□ 0.79
MSH6-203ENST00000420813 MEIS2O14770 477 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms