RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CCDC8Q9H0W5 538 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-206ENST00000420746 MTMR4Q9NYA4 1195 aa10.74□□□□□ -0.69
TRIM39-206ENST00000420746 BARX2Q9UMQ3 279 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-206ENST00000420746 NR2E1Q9Y466 385 aa10.74□□□□□ -0.69
TRIM39-206ENST00000420746 MAP1BP46821 2468 aaKnown RBP10.74□□□□□ -0.69
TRIM39-206ENST00000420746 B4DLN1 442 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 HAS3O00219 553 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 MBD4O95243 580 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 BRD1O95696 1058 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 TTLL1O95922 423 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 F2P00734 622 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 ICAM1P05362 532 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-206ENST00000420746 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
TRIM39-206ENST00000420746 PDE4DQ08499 809 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 BAATQ14032 418 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-206ENST00000420746 DGKDQ16760 1214 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 KIAA0319Q5VV43 1072 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 ADGRD2Q7Z7M1 963 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 SERINC5Q86VE9 423 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 DNERQ8NFT8 737 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 ATP8B4Q8TF62 1192 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 AFG1LQ8WV93 481 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 RUBCNQ92622 972 aa10.73□□□□□ -0.69
TRIM39-206ENST00000420746 CDCA3Q99618 268 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-206ENST00000420746 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
TRIM39-206ENST00000420746 SURF6O75683 361 aaKnown RBP10.72□□□□□ -0.69
TRIM39-206ENST00000420746 ARIH2O95376 493 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 GH1P01241 217 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 AOC1P19801 751 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 NRIP1P48552 1158 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 PSEN2P49810 448 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 SBK1Q52WX2 424 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 CCDC62Q6P9F0 684 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 EMID1Q96A84 441 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-206ENST00000420746 MFSD1Q9H3U5 465 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 MKNK2Q9HBH9 465 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 CCPG1Q9ULG6 757 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 PLIN4Q96Q06 1357 aa10.72□□□□□ -0.69
TRIM39-206ENST00000420746 THPOP40225 353 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 IKQ13123 557 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-206ENST00000420746 MFSD10Q14728 455 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-206ENST00000420746 OTOGLQ3ZCN5 2332 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 FAM208BQ5VWN6 2430 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 CWF19L1Q69YN2 538 aaKnown RBP10.71□□□□□ -0.69
TRIM39-206ENST00000420746 TMEM184AQ6ZMB5 413 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 SPPL3Q8TCT6 385 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-206ENST00000420746 CEP95Q96GE4 821 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 RTP3Q9BQQ7 232 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 ZNF287Q9HBT7 754 aa10.71□□□□□ -0.69
TRIM39-206ENST00000420746 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.7
TRIM39-206ENST00000420746 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
TRIM39-206ENST00000420746 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 ITGB1P05556 798 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 SRGAP2BP0DMP2 458 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 DNAJB1P25685 340 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 ADD2P35612 726 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 SLC1A4P43007 532 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-206ENST00000420746 KIAA0753Q2KHM9 967 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 ZC3H14Q6PJT7 736 aaKnown RBP10.7□□□□□ -0.7
TRIM39-206ENST00000420746 DTWD2Q8NBA8 298 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 CYP2W1Q8TAV3 490 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 S1PR5Q9H228 398 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 MRS2Q9HD23 443 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 PNMA2Q9UL42 364 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
TRIM39-206ENST00000420746 NFIBO00712 420 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 ADRB1P08588 477 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 HOXD8P13378 290 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-206ENST00000420746 HOXB8P17481 243 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-206ENST00000420746 HOXC8P31273 242 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 SLC30A10Q6XR72 485 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 DHX37Q8IY37 1157 aaKnown RBP10.69□□□□□ -0.7
TRIM39-206ENST00000420746 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
TRIM39-206ENST00000420746 BORCS6Q96GS4 357 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 NECTIN4Q96NY8 510 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 ALG1Q9BT22 464 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 RANBP17Q9H2T7 1088 aaKnown RBP10.69□□□□□ -0.7
TRIM39-206ENST00000420746 TLE6Q9H808 572 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 SLC4A4Q9Y6R1 1079 aa10.69□□□□□ -0.7
TRIM39-206ENST00000420746 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 CSPG5O95196 566 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 ZNF200P98182 395 aaPredicted RBP10.68□□□□□ -0.7
TRIM39-206ENST00000420746 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 UBE3AQ05086 875 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 KCNC3Q14003 757 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 UBE3CQ15386 1083 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 DUSP6Q16828 381 aa10.68□□□□□ -0.7
TRIM39-206ENST00000420746 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms