RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 HAS1Q92839 578 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 KCNMB3Q9NPA1 279 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
TMEM53-206ENST00000420706 SYNGAP1Q96PV0 1343 aa14.15□□□□□ -0.15
TMEM53-206ENST00000420706 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 TBX3O15119 743 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 HSPA8P11142 646 aaKnown RBP14.14□□□□□ -0.15
TMEM53-206ENST00000420706 SETQ01105 290 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-206ENST00000420706 SEMA3FQ13275 785 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 IRF5Q13568 498 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
TMEM53-206ENST00000420706 SEPT14Q6ZU15 432 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 ETNPPLQ8TBG4 499 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 KATNBL1Q9H079 304 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 KCNH7Q9NS40 1196 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 MCM3APO60318 1980 aa14.14□□□□□ -0.15
TMEM53-206ENST00000420706 LRRC37A2A6NM11 1700 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 MARCH6O60337 910 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 ATP9AO75110 1047 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 PRPHP41219 470 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 PRMT2P55345 433 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 MTMR1Q13613 665 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 IL17AQ16552 155 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 GNPTABQ3T906 1256 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 TAPT1Q6NXT6 567 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 FBXO16Q8IX29 292 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-206ENST00000420706 SLFN12Q8IYM2 578 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 GJA10Q969M2 543 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 UIMC1Q96RL1 719 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
TMEM53-206ENST00000420706 VTA1Q9NP79 307 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-206ENST00000420706 PCDHA7Q9UN72 937 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 SRPRBQ9Y5M8 271 aaKnown RBP14.13□□□□□ -0.15
TMEM53-206ENST00000420706 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
TMEM53-206ENST00000420706 RBM47A0AV96 593 aaKnown RBP14.12□□□□□ -0.15
TMEM53-206ENST00000420706 CYP2C19P33261 490 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 TXKP42681 527 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 DTHD1Q6ZMT9 781 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 OTOP1Q7RTM1 612 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
TMEM53-206ENST00000420706 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 TRIB2Q92519 343 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 ZNF577Q9BSK1 485 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 ABHD16BQ9H3Z7 469 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 PDGFCQ9NRA1 345 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 TRIM17Q9Y577 477 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 ELP1O95163 1332 aa14.12□□□□□ -0.15
TMEM53-206ENST00000420706 IPO5O00410 1097 aaKnown RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 DHX15O43143 795 aaKnown RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 ADCY3O60266 1144 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PSMD10O75832 226 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 ZNF865P0CJ78 1059 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 TGFB3P10600 412 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 KCNA2P16389 499 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 TECP42680 631 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 SP2Q02086 613 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 GRIN1Q05586 938 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 ITGB3BPQ13352 177 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PRAMEF19Q5SWL8 479 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 AXDND1Q5T1B0 1012 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 KCNV1Q6PIU1 500 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 KRI1Q8N9T8 703 aaKnown RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 RAET1EQ8TD07 263 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 CLIC6Q96NY7 704 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 SENP7Q9BQF6 1050 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 TTC12Q9H892 705 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PKD2L1Q9P0L9 805 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
TMEM53-206ENST00000420706 PCDHA12Q9UN75 941 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
TMEM53-206ENST00000420706 VWA3AA6NCI4 1184 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 CUTAO60888 179 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 ARIH2O95376 493 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 MCM4P33991 863 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 ME1P48163 572 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
TMEM53-206ENST00000420706 PDIA5Q14554 519 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 TTLL4Q14679 1199 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 MFSD14CQ5VZR4 134 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 ADALQ6DHV7 355 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 CCDC62Q6P9F0 684 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 RIT2Q99578 217 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 TEKT3Q9BXF9 490 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 CSRNP2Q9H175 543 aa14.1□□□□□ -0.15
TMEM53-206ENST00000420706 BCAS3Q9H6U6 928 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms