RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GAS2L1Q99501 681 aaPredicted RBP24.61■■□□□ 1.53
PTPN4-202ENST00000420482 F2P00734 622 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 IQCF3P0C7M6 154 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 PSEN2P49810 448 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 MFSD10Q14728 455 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 KAT2BQ92831 832 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 FTOQ9C0B1 505 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTPN4-202ENST00000420482 GTF2IRD1Q9UHL9 959 aa24.6■■□□□ 1.53
PTPN4-202ENST00000420482 RGS20O76081 388 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 PBX2P40425 430 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 KIAA0753Q2KHM9 967 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 XRRA1Q6P2D8 792 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 PPP1R13LQ8WUF5 828 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 ALG1Q9BT22 464 aa24.59■■□□□ 1.53
PTPN4-202ENST00000420482 CHD9Q3L8U1 2897 aa24.58■■□□□ 1.53
PTPN4-202ENST00000420482 PIK3CDO00329 1044 aa24.58■■□□□ 1.53
PTPN4-202ENST00000420482 NOP56O00567 594 aaKnown RBP24.58■■□□□ 1.53
PTPN4-202ENST00000420482 ATP2A2P16615 1042 aaKnown RBP24.58■■□□□ 1.53
PTPN4-202ENST00000420482 UBA1P22314 1058 aaKnown RBP24.58■■□□□ 1.53
PTPN4-202ENST00000420482 NEDD9Q14511 834 aa24.58■■□□□ 1.53
PTPN4-202ENST00000420482 GDF6Q6KF10 455 aaPredicted RBP24.58■■□□□ 1.53
PTPN4-202ENST00000420482 IL31RAQ8NI17 732 aa24.58■■□□□ 1.53
PTPN4-202ENST00000420482 FRMPD4Q14CM0 1322 aa24.58■■□□□ 1.52
PTPN4-202ENST00000420482 BAZ2BQ9UIF8 2168 aaKnown RBP24.57■■□□□ 1.52
PTPN4-202ENST00000420482 ZNF286BP0CG31 522 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 HOXD8P13378 290 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-202ENST00000420482 FANCBQ8NB91 859 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 NEK1Q96PY6 1258 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 SLC9A7Q96T83 725 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 HDAC6Q9UBN7 1215 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 PCDHA11Q9Y5I1 949 aa24.57■■□□□ 1.52
PTPN4-202ENST00000420482 TANC1Q9C0D5 1861 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 FIBPO43427 364 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 CDC45O75419 566 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 BAIAP3O94812 1187 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 PLEKHA8P1O95397 391 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 SELPP16109 830 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 KRT32Q14532 448 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 HSDL1Q3SXM5 330 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 SGMS1Q86VZ5 419 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 SRBD1Q8N5C6 995 aaKnown RBP24.56■■□□□ 1.52
PTPN4-202ENST00000420482 PHOSPHO2Q8TCD6 241 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 INPP4AQ96PE3 977 aaPredicted RBP24.56■■□□□ 1.52
PTPN4-202ENST00000420482 PSTPIP2Q9H939 334 aa24.56■■□□□ 1.52
PTPN4-202ENST00000420482 MYH7BA7E2Y1 1941 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 HAS3O00219 553 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 ICAM3P32942 547 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 SP2Q02086 613 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 PTK7Q13308 1070 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 PCNX4Q63HM2 1172 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 LRRC8DQ7L1W4 858 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 NLRX1Q86UT6 975 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 USP38Q8NB14 1042 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 GIMAP8Q8ND71 665 aaPredicted RBP24.55■■□□□ 1.52
PTPN4-202ENST00000420482 NKX2-4Q9H2Z4 354 aa24.55■■□□□ 1.52
PTPN4-202ENST00000420482 RBM28Q9NW13 759 aaKnown RBP24.55■■□□□ 1.52
PTPN4-202ENST00000420482 KIF28PB7ZC32 967 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 SORBS3O60504 671 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 RXRAP19793 462 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 KCNJ6P48051 423 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 MRPS9P82933 396 aaKnown RBP24.54■■□□□ 1.52
PTPN4-202ENST00000420482 RBL2Q08999 1139 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 PPP2R2DQ66LE6 453 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 USP17L6PQ6QN14 398 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 METTL7BQ6UX53 244 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 MICU3Q86XE3 530 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 SYMPKQ92797 1274 aaKnown RBP24.54■■□□□ 1.52
PTPN4-202ENST00000420482 CDHR1Q96JP9 859 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 USP26Q9BXU7 913 aa24.54■■□□□ 1.52
PTPN4-202ENST00000420482 SCN5AQ14524 2016 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 SPATA31C2B4DYI2 1134 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 H3BRB1 525 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 MEIS2O14770 477 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 HMGB1P09429 215 aaKnown RBP24.53■■□□□ 1.52
PTPN4-202ENST00000420482 ZFP91Q96JP5 570 aaPredicted RBP24.53■■□□□ 1.52
PTPN4-202ENST00000420482 LRRC2Q9BYS8 371 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 PRDM12Q9H4Q4 367 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 TUT1Q9H6E5 874 aaKnown RBP24.53■■□□□ 1.52
PTPN4-202ENST00000420482 EHMT1Q9H9B1 1298 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 RTEL1Q9NZ71 1219 aa24.53■■□□□ 1.52
PTPN4-202ENST00000420482 SPDYE3A6NKU9 549 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 CKBP12277 381 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 TMTC3Q6ZXV5 915 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 DHX32Q7L7V1 743 aaKnown RBP24.52■■□□□ 1.52
PTPN4-202ENST00000420482 CMTR1Q8N1G2 835 aaKnown RBP24.52■■□□□ 1.52
PTPN4-202ENST00000420482 CCDC82Q8N4S0 544 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 VWCEQ96DN2 955 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 CCDC136Q96JN2 1154 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 SENP7Q9BQF6 1050 aa24.52■■□□□ 1.52
PTPN4-202ENST00000420482 ZNF215Q9UL58 517 aaPredicted RBP24.52■■□□□ 1.52
PTPN4-202ENST00000420482 YBX2Q9Y2T7 364 aaKnown RBP24.52■■□□□ 1.52
PTPN4-202ENST00000420482 RABGGTBP53611 331 aa24.51■■□□□ 1.51
PTPN4-202ENST00000420482 TSGA10IPQ3SY00 556 aa24.51■■□□□ 1.51
PTPN4-202ENST00000420482 CYFIP1Q7L576 1253 aa24.51■■□□□ 1.51
PTPN4-202ENST00000420482 TEX2Q8IWB9 1127 aa24.51■■□□□ 1.51
PTPN4-202ENST00000420482 GPKOWQ92917 476 aaPredicted RBP eCLIP24.51■■□□□ 1.51
PTPN4-202ENST00000420482 C16orf70Q9BSU1 422 aa24.51■■□□□ 1.51
PTPN4-202ENST00000420482 C17orf102A2RUQ5 167 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 EFCAB14O75071 495 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 LGALS2P05162 132 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms