RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
NOD1-205ENST00000419799 DHX38Q92620 1227 aaKnown RBP16.07■□□□□ 0.16
NOD1-205ENST00000419799 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
NOD1-205ENST00000419799 SIP14410 1827 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 GRXCR2A6NFK2 248 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
NOD1-205ENST00000419799 CDC45O75419 566 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 ARIH2O95376 493 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 MMP3P08254 477 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 CKBP12277 381 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 MRE11P49959 708 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 IKBKEQ14164 716 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 PTCRAQ6ISU1 281 aaPredicted RBP16.06■□□□□ 0.16
NOD1-205ENST00000419799 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
NOD1-205ENST00000419799 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 SLC27A2O14975 620 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 DHX16O60231 1041 aaKnown RBP16.05■□□□□ 0.16
NOD1-205ENST00000419799 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 NT5C2P49902 561 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 CSPP1Q1MSJ5 1256 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 TCTN1Q2MV58 587 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 CASC1Q6TDU7 716 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 AFG1LQ8WV93 481 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 KAT2BQ92831 832 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 SENP2Q9HC62 589 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
NOD1-205ENST00000419799 TRIP12Q14669 1992 aaPredicted RBP16.04■□□□□ 0.16
NOD1-205ENST00000419799 POTEB3A0JP26 581 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 ERICH2A1L162 156 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 GH1P01241 217 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 PARP1P09874 1014 aaKnown RBP16.04■□□□□ 0.16
NOD1-205ENST00000419799 CASTP20810 708 aaKnown RBP16.04■□□□□ 0.16
NOD1-205ENST00000419799 NHLH1Q02575 133 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 SEC23AQ15436 765 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
NOD1-205ENST00000419799 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 POTEBQ6S5H4 581 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 FBXO22Q8NEZ5 403 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 MRPL38Q96DV4 380 aaKnown RBP16.04■□□□□ 0.16
NOD1-205ENST00000419799 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 MAF1Q9H063 256 aa16.04■□□□□ 0.16
NOD1-205ENST00000419799 DCXO43602 365 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 ANTXR2P58335 489 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 PTK7Q13308 1070 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 WTAPQ15007 396 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 USH1GQ495M9 461 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 C17orf80Q9BSJ5 609 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 PPP4R2Q9NY27 417 aa16.03■□□□□ 0.16
NOD1-205ENST00000419799 MUC6Q6W4X9 2439 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 DGKDQ16760 1214 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 PTPROQ16827 1216 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 TRIM71Q2Q1W2 868 aaKnown RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 FAM117BQ6P1L5 589 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 MB21D2Q8IYB1 491 aaPredicted RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 C7orf31Q8N865 590 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
NOD1-205ENST00000419799 SAMD11Q96NU1 681 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 HDAC6Q9UBN7 1215 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 PRKAG3Q9UGI9 489 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 FAM50BQ9Y247 325 aa16.02■□□□□ 0.16
NOD1-205ENST00000419799 PRC1O43663 620 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 LGR5O75473 907 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 COL19A1Q14993 1142 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
NOD1-205ENST00000419799 CDC37Q16543 378 aaPredicted RBP16.01■□□□□ 0.15
NOD1-205ENST00000419799 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 TIGD5Q53EQ6 642 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 ZNF618Q5T7W0 954 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
NOD1-205ENST00000419799 EMID1Q96A84 441 aaPredicted RBP16.01■□□□□ 0.15
NOD1-205ENST00000419799 PABPC5Q96DU9 382 aaKnown RBP16.01■□□□□ 0.15
NOD1-205ENST00000419799 FBXL18Q96ME1 805 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
NOD1-205ENST00000419799 EMSYQ7Z589 1322 aa16■□□□□ 0.15
NOD1-205ENST00000419799 HAS3O00219 553 aa16■□□□□ 0.15
NOD1-205ENST00000419799 F2P00734 622 aa16■□□□□ 0.15
NOD1-205ENST00000419799 AMHP03971 560 aa16■□□□□ 0.15
NOD1-205ENST00000419799 PSEN2P49810 448 aa16■□□□□ 0.15
NOD1-205ENST00000419799 MBTPS1Q14703 1052 aa16■□□□□ 0.15
NOD1-205ENST00000419799 NECTIN1Q15223 517 aa16■□□□□ 0.15
NOD1-205ENST00000419799 EPC2Q52LR7 807 aa16■□□□□ 0.15
NOD1-205ENST00000419799 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
NOD1-205ENST00000419799 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
NOD1-205ENST00000419799 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms