RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SIN3BO75182 1162 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 KIF4AO95239 1232 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 RECKO95980 971 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 IGHDP01880 384 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 ZFYP08048 801 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 CYP2C8P10632 490 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 CYP2D6P10635 497 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 ACPPP15309 386 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 SHMT1P34896 483 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 IRX6P78412 446 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 CAP1Q01518 475 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 GABPAQ06546 454 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 PKN2Q16513 984 aaKnown RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 RNFT1Q5M7Z0 435 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 TREML2Q5T2D2 321 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 PEAR1Q5VY43 1037 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 TATDN1Q6P1N9 297 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 APPBP2Q92624 585 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 WDR18Q9BV38 432 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 OSBPL7Q9BZF2 842 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 UBE2OQ9C0C9 1292 aaKnown RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 ATP8A2Q9NTI2 1148 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 GINM1Q9NU53 330 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 DNAJB12Q9NXW2 375 aaKnown RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 STAP2Q9UGK3 403 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 KLF15Q9UIH9 416 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 AGTPBP1Q9UPW5 1226 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 SLC45A1Q9Y2W3 748 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 TRIM17Q9Y577 477 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 AK5Q9Y6K8 562 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 SLC4A4Q9Y6R1 1079 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 ZSWIM8A7E2V4 1837 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 A0A1W2PP55 124 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 CCDC85CA6NKD9 419 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 GH2P01242 217 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 EIF4BP23588 611 aaKnown RBP8.28□□□□□ -1.08
HMGN1-205ENST00000419378 PDE1AP54750 535 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 HMGCS2P54868 508 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 GPLD1P80108 840 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
HMGN1-205ENST00000419378 FBXO46Q6PJ61 603 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-205ENST00000419378 C17orf99Q6UX52 265 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 OTOP1Q7RTM1 612 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 STRBPQ96SI9 672 aaKnown RBP8.28□□□□□ -1.08
HMGN1-205ENST00000419378 FSD1Q9BTV5 496 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 ARHGAP39Q9C0H5 1083 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 CPA4Q9UI42 421 aa8.28□□□□□ -1.08
HMGN1-205ENST00000419378 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
HMGN1-205ENST00000419378 MYH8P13535 1937 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 J3QW42 95 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 M0R2C6 588 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 GPAA1O43292 621 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 ARAFP10398 606 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 BCRP11274 1271 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 MAP2K3P46734 347 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 BACE1P56817 501 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 LACTBP83111 547 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-205ENST00000419378 NUCB1Q02818 461 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 GRM2Q14416 872 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 ABCB5Q2M3G0 1257 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 CERKLQ49MI3 558 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-205ENST00000419378 C12orf60Q5U649 245 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 CHD1LQ86WJ1 897 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 AMOTL1Q8IY63 956 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 DYNLL2Q96FJ2 89 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 BCO2Q9BYV7 579 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 SUV39H2Q9H5I1 410 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
HMGN1-205ENST00000419378 AVENQ9NQS1 362 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-205ENST00000419378 ARPP21Q9UBL0 812 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-205ENST00000419378 GSG1L2A8MUP6 293 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 SMIM22K7EJ46 135 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 GIPC1O14908 333 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 ADH6P28332 368 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 CTGFP29279 349 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
HMGN1-205ENST00000419378 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.098e-10■■□□□ 13.3
HMGN1-205ENST00000419378 KIF22Q14807 665 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 RAB3GAP1Q15042 981 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 CTR9Q6PD62 1173 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 C16orf86Q6ZW13 317 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 CEP120Q8N960 986 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 SMCR8Q8TEV9 937 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-205ENST00000419378 EVI5LQ96CN4 794 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 SPACA7Q96KW9 195 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms