RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 BARGINQ6ZT62 677 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 TEX11Q8IYF3 940 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 NYXQ9GZU5 481 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 NFU1Q9UMS0 254 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 BTDP43251 543 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 LIG3P49916 1009 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 PTPROQ16827 1216 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 TPTE2Q6XPS3 522 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 GUF1Q8N442 669 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 GSTO1P78417 241 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 PDXDC1Q6P996 788 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 BAP1Q92560 729 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 IQCDQ96DY2 449 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 EPB41L5Q9HCM4 733 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 PDCLQ13371 301 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 SLC9C1Q4G0N8 1177 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
SEMA3B-203ENST00000419007 GOLGA8KD6RF30 607 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 PALMO75781 387 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 CARSP49589 748 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 SLC10A5Q5PT55 438 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 LSM14BQ9BX40 385 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 STK17AQ9UEE5 414 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 PVALEFA0A1B0GWK0 134 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 HEXIM1O94992 359 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 GLI1P08151 1106 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 PRLRP16471 622 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 LRRC63Q05C16 580 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 EHHADHQ08426 723 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 NFIXQ14938 502 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 UBE2SQ16763 222 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 SFMBT2Q5VUG0 894 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 RAD54LQ92698 747 aa16.75■□□□□ 0.27
SEMA3B-203ENST00000419007 LDHCP07864 332 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 EPS15P42566 896 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 ADCY7P51828 1080 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 EMBQ6PCB8 327 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 ZIM3Q96PE6 472 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 KRT12Q99456 494 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 GNPATO15228 680 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 RAD21O60216 631 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 TTMPQ5BVD1 217 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 CFAP58Q5T655 872 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 SHOX2O60902 331 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM153BP0C7A2 387 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 KCTD19Q17RG1 926 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM153CQ494X1 144 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM153AQ9UHL3 310 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM169AQ9Y6X4 670 aa16.74■□□□□ 0.27
SEMA3B-203ENST00000419007 LAMB1P07942 1786 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 KIAA0753Q2KHM9 967 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 TADA2BQ86TJ2 420 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 KLHL7Q8IXQ5 586 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 MTMR9Q96QG7 549 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 MYH1P12882 1939 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 NDUFAB1O14561 156 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 EIF3HO15372 352 aaKnown RBP eCLIP16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 NNTQ13423 1086 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 NEDD1Q8NHV4 660 aa16.73■□□□□ 0.27
SEMA3B-203ENST00000419007 LCA5LO95447 670 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 KLRC1P26715 233 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 FKBP3Q00688 224 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 ITIH3Q06033 890 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 PICALMQ13492 652 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM133AQ8N9E0 248 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 COASYQ13057 564 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 ECM1Q16610 540 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM26FQ5R3K3 315 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 HGSNATQ68CP4 663 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 LUC7LQ9NQ29 371 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.278e-7■■□□□ 11.8
SEMA3B-203ENST00000419007 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms